Analysis of interatomic Contacts of Structural Units in PDB entry:
8INR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8INR entry

There are 5 chains in PDB entry 8INR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
R	ILE 38	CYS 312
L	SER 1	VAL 13
A	LEU 12	LEU 394
B	LEU 4	SER 343
G	ALA 10	ARG 62

There are 25 helices in PDB entry 8INR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	R	39	63	Right-handed alpha
Helix 2	AA2	R	69	100	Right-handed alpha
Helix 3	AA3	R	107	146	Right-handed alpha
Helix 4	AA4	R	147	153	Right-handed 310
Helix 5	AA5	R	155	180	Right-handed alpha
Helix 6	AA6	R	183	221	Right-handed alpha
Helix 7	AA7	R	232	264	Right-handed alpha
Helix 8	AA8	R	267	275	Right-handed alpha
Helix 9	AA9	R	276	296	Right-handed alpha
Helix 10	AB1	R	299	311	Right-handed alpha
Helix 11	AB2	A	13	39	Right-handed alpha
Helix 12	AB3	A	52	60	Right-handed alpha
Helix 13	AB4	A	233	239	Right-handed 310
Helix 14	AB5	A	265	279	Right-handed alpha
Helix 15	AB6	A	293	304	Right-handed alpha
Helix 16	AB7	A	307	311	Right-handed 310
Helix 17	AB8	A	314	318	Right-handed 310
Helix 18	AB9	A	331	352	Right-handed alpha
Helix 19	AC1	A	370	391	Right-handed alpha
Helix 20	AC2	B	5	25	Right-handed alpha
Helix 21	AC3	B	31	35	Right-handed 310
Helix 22	AC4	G	11	24	Right-handed alpha
Helix 23	AC5	G	29	34	Right-handed alpha
Helix 24	AC6	G	40	44	Right-handed 310
Helix 25	AC7	G	55	59	Right-handed 310

There are 8 sheets in PDB entry 8INR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	208	214	first strand
Strand 2	A	217	223	anti-parallel
Strand 3	A	40	46	parallel
Strand 4	A	243	249	parallel
Strand 5	A	286	292	parallel
Strand 6	A	359	362	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	52	first strand
Strand 2	B	335	341	anti-parallel
Strand 3	B	327	330	anti-parallel
Strand 4	B	319	320	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	63	first strand
Strand 2	B	69	74	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	88	94	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	100	105	first strand
Strand 2	B	111	116	anti-parallel
Strand 3	B	121	125	anti-parallel
Strand 4	B	134	139	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	153	first strand
Strand 2	B	156	161	anti-parallel
Strand 3	B	165	170	anti-parallel
Strand 4	B	178	181	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	192	first strand
Strand 2	B	198	203	anti-parallel
Strand 3	B	207	212	anti-parallel
Strand 4	B	218	222	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	234	first strand
Strand 2	B	240	245	anti-parallel
Strand 3	B	250	254	anti-parallel
Strand 4	B	260	264	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	278	first strand
Strand 2	B	285	289	anti-parallel
Strand 3	B	294	297	anti-parallel
Strand 4	B	304	308	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8INR

Analysis of interatomic Contacts of Structural Units in PDB entry:
8INR