Analysis of interatomic Contacts of Structural Units in PDB entry:
8INZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8INZ entry

There are 4 chains in PDB entry 8INZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	GLY 50	ARG 543
A	GLY 50	ARG 543
B	GLY 50	ARG 543
D	GLY 50	ARG 543

There are100 helices in PDB entry 8INZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	58	65	Right-handed alpha
Helix 2	AA2	C	67	80	Right-handed alpha
Helix 3	AA3	C	90	117	Right-handed alpha
Helix 4	AA4	C	123	143	Right-handed alpha
Helix 5	AA5	C	144	146	Right-handed 310
Helix 6	AA6	C	162	170	Right-handed alpha
Helix 7	AA7	C	172	181	Right-handed alpha
Helix 8	AA8	C	182	191	Right-handed alpha
Helix 9	AA9	C	212	217	Right-handed alpha
Helix 10	AB1	C	218	222	Right-handed 310
Helix 11	AB2	C	223	242	Right-handed alpha
Helix 12	AB3	C	245	276	Right-handed alpha
Helix 13	AB4	C	282	287	Right-handed alpha
Helix 14	AB5	C	293	310	Right-handed alpha
Helix 15	AB6	C	321	351	Right-handed alpha
Helix 16	AB7	C	354	375	Right-handed alpha
Helix 17	AB8	C	377	393	Right-handed alpha
Helix 18	AB9	C	398	406	Right-handed alpha
Helix 19	AC1	C	407	419	Right-handed alpha
Helix 20	AC2	C	419	424	Right-handed alpha
Helix 21	AC3	C	426	431	Right-handed alpha
Helix 22	AC4	C	433	442	Right-handed alpha
Helix 23	AC5	C	492	499	Right-handed alpha
Helix 24	AC6	C	519	529	Right-handed alpha
Helix 25	AC7	C	529	543	Right-handed alpha
Helix 26	AC8	A	58	65	Right-handed alpha
Helix 27	AC9	A	67	80	Right-handed alpha
Helix 28	AD1	A	90	117	Right-handed alpha
Helix 29	AD2	A	123	143	Right-handed alpha
Helix 30	AD3	A	144	146	Right-handed 310
Helix 31	AD4	A	162	170	Right-handed alpha
Helix 32	AD5	A	172	181	Right-handed alpha
Helix 33	AD6	A	182	191	Right-handed alpha
Helix 34	AD7	A	212	217	Right-handed alpha
Helix 35	AD8	A	218	222	Right-handed 310
Helix 36	AD9	A	223	242	Right-handed alpha
Helix 37	AE1	A	245	276	Right-handed alpha
Helix 38	AE2	A	282	287	Right-handed alpha
Helix 39	AE3	A	293	310	Right-handed alpha
Helix 40	AE4	A	321	351	Right-handed alpha
Helix 41	AE5	A	354	375	Right-handed alpha
Helix 42	AE6	A	377	393	Right-handed alpha
Helix 43	AE7	A	398	406	Right-handed alpha
Helix 44	AE8	A	407	419	Right-handed alpha
Helix 45	AE9	A	419	424	Right-handed alpha
Helix 46	AF1	A	426	431	Right-handed alpha
Helix 47	AF2	A	433	442	Right-handed alpha
Helix 48	AF3	A	492	499	Right-handed alpha
Helix 49	AF4	A	519	529	Right-handed alpha
Helix 50	AF5	A	529	543	Right-handed alpha
Helix 51	AF6	B	58	65	Right-handed alpha
Helix 52	AF7	B	67	80	Right-handed alpha
Helix 53	AF8	B	90	117	Right-handed alpha
Helix 54	AF9	B	123	143	Right-handed alpha
Helix 55	AG1	B	144	146	Right-handed 310
Helix 56	AG2	B	162	170	Right-handed alpha
Helix 57	AG3	B	172	181	Right-handed alpha
Helix 58	AG4	B	182	191	Right-handed alpha
Helix 59	AG5	B	212	217	Right-handed alpha
Helix 60	AG6	B	218	222	Right-handed 310
Helix 61	AG7	B	223	242	Right-handed alpha
Helix 62	AG8	B	245	276	Right-handed alpha
Helix 63	AG9	B	282	287	Right-handed alpha
Helix 64	AH1	B	293	310	Right-handed alpha
Helix 65	AH2	B	321	351	Right-handed alpha
Helix 66	AH3	B	354	375	Right-handed alpha
Helix 67	AH4	B	377	393	Right-handed alpha
Helix 68	AH5	B	398	406	Right-handed alpha
Helix 69	AH6	B	407	419	Right-handed alpha
Helix 70	AH7	B	419	424	Right-handed alpha
Helix 71	AH8	B	426	431	Right-handed alpha
Helix 72	AH9	B	433	442	Right-handed alpha
Helix 73	AI1	B	492	499	Right-handed alpha
Helix 74	AI2	B	519	529	Right-handed alpha
Helix 75	AI3	B	529	543	Right-handed alpha
Helix 76	AI4	D	58	65	Right-handed alpha
Helix 77	AI5	D	67	80	Right-handed alpha
Helix 78	AI6	D	90	117	Right-handed alpha
Helix 79	AI7	D	123	143	Right-handed alpha
Helix 80	AI8	D	144	146	Right-handed 310
Helix 81	AI9	D	162	170	Right-handed alpha
Helix 82	AJ1	D	172	181	Right-handed alpha
Helix 83	AJ2	D	182	191	Right-handed alpha
Helix 84	AJ3	D	212	217	Right-handed alpha
Helix 85	AJ4	D	218	222	Right-handed 310
Helix 86	AJ5	D	223	242	Right-handed alpha
Helix 87	AJ6	D	245	276	Right-handed alpha
Helix 88	AJ7	D	282	287	Right-handed alpha
Helix 89	AJ8	D	293	310	Right-handed alpha
Helix 90	AJ9	D	321	351	Right-handed alpha
Helix 91	AK1	D	354	375	Right-handed alpha
Helix 92	AK2	D	377	393	Right-handed alpha
Helix 93	AK3	D	398	406	Right-handed alpha
Helix 94	AK4	D	407	419	Right-handed alpha
Helix 95	AK5	D	419	424	Right-handed alpha
Helix 96	AK6	D	426	431	Right-handed alpha
Helix 97	AK7	D	433	442	Right-handed alpha
Helix 98	AK8	D	492	499	Right-handed alpha
Helix 99	AK9	D	519	529	Right-handed alpha
Helix 100	AL1	D	529	543	Right-handed alpha

There are 8 sheets in PDB entry 8INZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	445	448	first strand
Strand 2	C	513	517	anti-parallel
Strand 3	C	465	470	anti-parallel
Strand 4	C	490	491	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	454	456	first strand
Strand 2	C	506	508	anti-parallel
Strand 3	C	473	475	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	445	448	first strand
Strand 2	A	513	517	anti-parallel
Strand 3	A	465	470	anti-parallel
Strand 4	A	490	491	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	454	456	first strand
Strand 2	A	506	508	anti-parallel
Strand 3	A	473	475	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	445	448	first strand
Strand 2	B	513	517	anti-parallel
Strand 3	B	465	470	anti-parallel
Strand 4	B	490	491	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	454	456	first strand
Strand 2	B	506	508	anti-parallel
Strand 3	B	473	475	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	445	448	first strand
Strand 2	D	513	517	anti-parallel
Strand 3	D	465	470	anti-parallel
Strand 4	D	490	491	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	454	456	first strand
Strand 2	D	506	508	anti-parallel
Strand 3	D	473	475	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8INZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8INZ