Analysis of interatomic Contacts of Structural Units in PDB entry:
8IS0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IS0 entry

There are 2 chains in PDB entry 8IS0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO -5PRO 371
B
 HIS -1PRO 371
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 8IS0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 10Right-handed alpha
Helix 2
AA2
A
20 25Right-handed alpha
Helix 3
AA3
A
28 46Right-handed alpha
Helix 4
AA4
A
46 54Right-handed alpha
Helix 5
AA5
A
54 70Right-handed alpha
Helix 6
AA6
A
72 74Right-handed 310
Helix 7
AA7
A
81 92Right-handed alpha
Helix 8
AA8
A
106 116Right-handed alpha
Helix 9
AA9
A
132 143Right-handed alpha
Helix 10
AB1
A
162 173Right-handed alpha
Helix 11
AB2
A
217 224Right-handed alpha
Helix 12
AB3
A
238 244Right-handed alpha
Helix 13
AB4
A
249 267Right-handed alpha
Helix 14
AB5
A
267 287Right-handed alpha
Helix 15
AB6
A
314 327Right-handed alpha
Helix 16
AB7
A
334 338Right-handed 310
Helix 17
AB8
A
356 369Right-handed alpha
Helix 18
AB9
B
2 10Right-handed alpha
Helix 19
AC1
B
20 25Right-handed alpha
Helix 20
AC2
B
28 46Right-handed alpha
Helix 21
AC3
B
46 54Right-handed alpha
Helix 22
AC4
B
54 70Right-handed alpha
Helix 23
AC5
B
72 74Right-handed 310
Helix 24
AC6
B
81 91Right-handed alpha
Helix 25
AC7
B
106 116Right-handed alpha
Helix 26
AC8
B
132 143Right-handed alpha
Helix 27
AC9
B
162 173Right-handed alpha
Helix 28
AD1
B
217 224Right-handed alpha
Helix 29
AD2
B
238 244Right-handed alpha
Helix 30
AD3
B
249 267Right-handed alpha
Helix 31
AD4
B
267 287Right-handed alpha
Helix 32
AD5
B
314 327Right-handed alpha
Helix 33
AD6
B
334 338Right-handed 310
Helix 34
AD7
B
356 369Right-handed alpha
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There are 7 sheets in PDB entry 8IS0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 18first strand
Strand 2
A
328 329parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 79first strand
Strand 2
A
212 216anti-parallel
Strand 3
A
196 200anti-parallel
Strand 4
A
177 180parallel
Strand 5
A
148 151parallel
Strand 6
A
98 101parallel
Strand 7
A
119 122parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 154first strand
Strand 2
A
157 160anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 294first strand
Strand 2
A
305 308anti-parallel
Strand 3
A
346 349anti-parallel
Strand 4
A
331 333anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 18first strand
Strand 2
B
328 329parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 79first strand
Strand 2
B
212 216anti-parallel
Strand 3
B
196 200anti-parallel
Strand 4
B
177 180parallel
Strand 5
B
148 151parallel
Strand 6
B
98 101parallel
Strand 7
B
119 122parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
293 294first strand
Strand 2
B
305 308anti-parallel
Strand 3
B
346 349anti-parallel
Strand 4
B
331 333anti-parallel
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