Analysis of interatomic Contacts of Structural Units in PDB entry:
8IU6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IU6 entry

There are 2 chains in PDB entry 8IU6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 186
B
 MET 1ASN 186
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 8IU6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 15Right-handed 310
Helix 2
AA2
A
17 19Right-handed 310
Helix 3
AA3
A
20 33Right-handed alpha
Helix 4
AA4
A
64 67Right-handed 310
Helix 5
AA5
A
68 80Right-handed alpha
Helix 6
AA6
A
111 122Right-handed alpha
Helix 7
AA7
A
141 147Right-handed alpha
Helix 8
AA8
A
154 174Right-handed alpha
Helix 9
AA9
A
177 186Right-handed alpha
Helix 10
AB1
B
11 15Right-handed 310
Helix 11
AB2
B
17 19Right-handed 310
Helix 12
AB3
B
20 33Right-handed alpha
Helix 13
AB4
B
64 67Right-handed 310
Helix 14
AB5
B
68 80Right-handed alpha
Helix 15
AB6
B
111 122Right-handed alpha
Helix 16
AB7
B
141 147Right-handed alpha
Helix 17
AB8
B
154 174Right-handed alpha
Helix 18
AB9
B
177 186Right-handed alpha
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There are 2 sheets in PDB entry 8IU6. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
44 50anti-parallel
Strand 3
A
55 61anti-parallel
Strand 4
A
3 6parallel
Strand 5
A
86 92parallel
Strand 6
A
127 132parallel
Strand 7
A
100 103anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 40first strand
Strand 2
B
44 51anti-parallel
Strand 3
B
54 61anti-parallel
Strand 4
B
2 6parallel
Strand 5
B
86 92parallel
Strand 6
B
127 132parallel
Strand 7
B
100 103anti-parallel
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