Analysis of interatomic Contacts of Structural Units in PDB entry:
8IX7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IX7 entry

There are 2 chains in PDB entry 8IX7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 5GLN 218
B
 ALA 2ARG 222
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 8IX7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 26Right-handed alpha
Helix 2
AA2
A
36 40Right-handed 310
Helix 3
AA3
A
44 51Right-handed alpha
Helix 4
AA4
A
68 80Right-handed alpha
Helix 5
AA5
A
91 93Right-handed 310
Helix 6
AA6
A
94 112Right-handed alpha
Helix 7
AA7
A
113 126Right-handed alpha
Helix 8
AA8
A
127 131Right-handed 310
Helix 9
AA9
A
135 157Right-handed alpha
Helix 10
AB1
A
169 174Right-handed alpha
Helix 11
AB2
A
175 186Right-handed alpha
Helix 12
AB3
A
189 194Right-handed alpha
Helix 13
AB4
A
195 206Right-handed alpha
Helix 14
AB5
A
208 218Right-handed alpha
Helix 15
AB6
B
13 26Right-handed alpha
Helix 16
AB7
B
36 43Right-handed 310
Helix 17
AB8
B
44 49Right-handed alpha
Helix 18
AB9
B
68 80Right-handed alpha
Helix 19
AC1
B
91 93Right-handed 310
Helix 20
AC2
B
94 112Right-handed alpha
Helix 21
AC3
B
113 126Right-handed alpha
Helix 22
AC4
B
127 130Right-handed 310
Helix 23
AC5
B
135 157Right-handed alpha
Helix 24
AC6
B
169 186Right-handed alpha
Helix 25
AC7
B
189 194Right-handed alpha
Helix 26
AC8
B
195 206Right-handed alpha
Helix 27
AC9
B
208 218Right-handed alpha
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There are 2 sheets in PDB entry 8IX7. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 33first strand
Strand 2
A
6 8parallel
Strand 3
A
58 60anti-parallel
Strand 4
A
65 67anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 33first strand
Strand 2
B
5 8parallel
Strand 3
B
58 60anti-parallel
Strand 4
B
65 67anti-parallel
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