Analysis of interatomic Contacts of Structural Units in PDB entry:
8IXO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8IXO entry

There are 3 chains in PDB entry 8IXO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
F	GLU 576	GLU 2547
A	GLU 576	GLU 2547
B	GLU 576	GLU 2547

There are198 helices in PDB entry 8IXO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	576	585	Right-handed alpha
Helix 2	AA2	F	586	596	Right-handed alpha
Helix 3	AA3	F	608	625	Right-handed alpha
Helix 4	AA4	F	631	650	Right-handed alpha
Helix 5	AA5	F	691	706	Right-handed alpha
Helix 6	AA6	F	708	715	Right-handed alpha
Helix 7	AA7	F	785	804	Right-handed alpha
Helix 8	AA8	F	804	818	Right-handed alpha
Helix 9	AA9	F	829	838	Right-handed alpha
Helix 10	AB1	F	842	844	Right-handed 310
Helix 11	AB2	F	845	868	Right-handed alpha
Helix 12	AB3	F	924	950	Right-handed alpha
Helix 13	AB4	F	967	971	Right-handed 310
Helix 14	AB5	F	973	1006	Right-handed alpha
Helix 15	AB6	F	1007	1023	Right-handed alpha
Helix 16	AB7	F	1025	1052	Right-handed alpha
Helix 17	AB8	F	1073	1080	Right-handed alpha
Helix 18	AB9	F	1093	1113	Right-handed alpha
Helix 19	AC1	F	1138	1145	Right-handed alpha
Helix 20	AC2	F	1149	1159	Right-handed alpha
Helix 21	AC3	F	1161	1175	Right-handed alpha
Helix 22	AC4	F	1178	1194	Right-handed alpha
Helix 23	AC5	F	1194	1200	Right-handed alpha
Helix 24	AC6	F	1202	1233	Right-handed alpha
Helix 25	AC7	F	1234	1242	Right-handed alpha
Helix 26	AC8	F	1243	1249	Right-handed alpha
Helix 27	AC9	F	1280	1297	Right-handed alpha
Helix 28	AD1	F	1300	1315	Right-handed alpha
Helix 29	AD2	F	1318	1363	Right-handed alpha
Helix 30	AD3	F	1402	1408	Right-handed alpha
Helix 31	AD4	F	1411	1415	Right-handed 310
Helix 32	AD5	F	1506	1524	Right-handed alpha
Helix 33	AD6	F	1524	1544	Right-handed alpha
Helix 34	AD7	F	1656	1669	Right-handed alpha
Helix 35	AD8	F	1672	1687	Right-handed alpha
Helix 36	AD9	F	1688	1702	Right-handed alpha
Helix 37	AE1	F	1708	1717	Right-handed alpha
Helix 38	AE2	F	1728	1748	Right-handed alpha
Helix 39	AE3	F	1771	1775	Right-handed alpha
Helix 40	AE4	F	1785	1803	Right-handed alpha
Helix 41	AE5	F	1957	1966	Right-handed alpha
Helix 42	AE6	F	1977	1994	Right-handed alpha
Helix 43	AE7	F	1995	1999	Right-handed 310
Helix 44	AE8	F	2006	2013	Right-handed alpha
Helix 45	AE9	F	2017	2041	Right-handed alpha
Helix 46	AF1	F	2043	2061	Right-handed alpha
Helix 47	AF2	F	2063	2069	Right-handed alpha
Helix 48	AF3	F	2077	2100	Right-handed alpha
Helix 49	AF4	F	2115	2128	Right-handed alpha
Helix 50	AF5	F	2130	2143	Right-handed alpha
Helix 51	AF6	F	2148	2175	Right-handed alpha
Helix 52	AF7	F	2184	2214	Right-handed alpha
Helix 53	AF8	F	2244	2246	Right-handed 310
Helix 54	AF9	F	2252	2263	Right-handed alpha
Helix 55	AG1	F	2266	2275	Right-handed alpha
Helix 56	AG2	F	2276	2279	Right-handed 310
Helix 57	AG3	F	2297	2311	Right-handed alpha
Helix 58	AG4	F	2348	2359	Right-handed alpha
Helix 59	AG5	F	2422	2424	Right-handed 310
Helix 60	AG6	F	2458	2463	Right-handed alpha
Helix 61	AG7	F	2465	2473	Right-handed alpha
Helix 62	AG8	F	2473	2484	Right-handed alpha
Helix 63	AG9	F	2489	2493	Right-handed 310
Helix 64	AH1	F	2500	2517	Right-handed alpha
Helix 65	AH2	F	2518	2535	Right-handed alpha
Helix 66	AH3	F	2535	2543	Right-handed alpha
Helix 67	AH4	A	577	585	Right-handed alpha
Helix 68	AH5	A	586	596	Right-handed alpha
Helix 69	AH6	A	608	625	Right-handed alpha
Helix 70	AH7	A	631	650	Right-handed alpha
Helix 71	AH8	A	691	706	Right-handed alpha
Helix 72	AH9	A	708	715	Right-handed alpha
Helix 73	AI1	A	785	804	Right-handed alpha
Helix 74	AI2	A	804	818	Right-handed alpha
Helix 75	AI3	A	829	838	Right-handed alpha
Helix 76	AI4	A	842	844	Right-handed 310
Helix 77	AI5	A	845	868	Right-handed alpha
Helix 78	AI6	A	924	950	Right-handed alpha
Helix 79	AI7	A	967	971	Right-handed 310
Helix 80	AI8	A	973	1006	Right-handed alpha
Helix 81	AI9	A	1007	1023	Right-handed alpha
Helix 82	AJ1	A	1025	1052	Right-handed alpha
Helix 83	AJ2	A	1073	1080	Right-handed alpha
Helix 84	AJ3	A	1093	1113	Right-handed alpha
Helix 85	AJ4	A	1138	1145	Right-handed alpha
Helix 86	AJ5	A	1149	1159	Right-handed alpha
Helix 87	AJ6	A	1161	1175	Right-handed alpha
Helix 88	AJ7	A	1178	1194	Right-handed alpha
Helix 89	AJ8	A	1194	1200	Right-handed alpha
Helix 90	AJ9	A	1202	1233	Right-handed alpha
Helix 91	AK1	A	1234	1242	Right-handed alpha
Helix 92	AK2	A	1243	1249	Right-handed alpha
Helix 93	AK3	A	1280	1297	Right-handed alpha
Helix 94	AK4	A	1300	1315	Right-handed alpha
Helix 95	AK5	A	1318	1363	Right-handed alpha
Helix 96	AK6	A	1402	1408	Right-handed alpha
Helix 97	AK7	A	1411	1415	Right-handed 310
Helix 98	AK8	A	1506	1524	Right-handed alpha
Helix 99	AK9	A	1524	1544	Right-handed alpha
Helix 100	AL1	A	1656	1669	Right-handed alpha
Helix 101	AL2	A	1672	1687	Right-handed alpha
Helix 102	AL3	A	1688	1702	Right-handed alpha
Helix 103	AL4	A	1708	1717	Right-handed alpha
Helix 104	AL5	A	1728	1748	Right-handed alpha
Helix 105	AL6	A	1771	1775	Right-handed alpha
Helix 106	AL7	A	1785	1803	Right-handed alpha
Helix 107	AL8	A	1957	1966	Right-handed alpha
Helix 108	AL9	A	1977	1994	Right-handed alpha
Helix 109	AM1	A	1995	1999	Right-handed 310
Helix 110	AM2	A	2006	2013	Right-handed alpha
Helix 111	AM3	A	2017	2041	Right-handed alpha
Helix 112	AM4	A	2043	2061	Right-handed alpha
Helix 113	AM5	A	2063	2069	Right-handed alpha
Helix 114	AM6	A	2077	2100	Right-handed alpha
Helix 115	AM7	A	2115	2128	Right-handed alpha
Helix 116	AM8	A	2130	2143	Right-handed alpha
Helix 117	AM9	A	2148	2175	Right-handed alpha
Helix 118	AN1	A	2184	2214	Right-handed alpha
Helix 119	AN2	A	2244	2246	Right-handed 310
Helix 120	AN3	A	2252	2263	Right-handed alpha
Helix 121	AN4	A	2266	2275	Right-handed alpha
Helix 122	AN5	A	2276	2279	Right-handed 310
Helix 123	AN6	A	2297	2311	Right-handed alpha
Helix 124	AN7	A	2348	2359	Right-handed alpha
Helix 125	AN8	A	2422	2424	Right-handed 310
Helix 126	AN9	A	2458	2463	Right-handed alpha
Helix 127	AO1	A	2465	2473	Right-handed alpha
Helix 128	AO2	A	2473	2484	Right-handed alpha
Helix 129	AO3	A	2489	2493	Right-handed 310
Helix 130	AO4	A	2500	2517	Right-handed alpha
Helix 131	AO5	A	2518	2535	Right-handed alpha
Helix 132	AO6	A	2535	2543	Right-handed alpha
Helix 133	AO7	B	577	585	Right-handed alpha
Helix 134	AO8	B	586	596	Right-handed alpha
Helix 135	AO9	B	608	625	Right-handed alpha
Helix 136	AP1	B	631	650	Right-handed alpha
Helix 137	AP2	B	691	706	Right-handed alpha
Helix 138	AP3	B	708	715	Right-handed alpha
Helix 139	AP4	B	785	804	Right-handed alpha
Helix 140	AP5	B	804	818	Right-handed alpha
Helix 141	AP6	B	829	838	Right-handed alpha
Helix 142	AP7	B	842	844	Right-handed 310
Helix 143	AP8	B	845	868	Right-handed alpha
Helix 144	AP9	B	924	950	Right-handed alpha
Helix 145	AQ1	B	967	971	Right-handed 310
Helix 146	AQ2	B	973	1006	Right-handed alpha
Helix 147	AQ3	B	1007	1023	Right-handed alpha
Helix 148	AQ4	B	1025	1052	Right-handed alpha
Helix 149	AQ5	B	1073	1080	Right-handed alpha
Helix 150	AQ6	B	1093	1113	Right-handed alpha
Helix 151	AQ7	B	1138	1145	Right-handed alpha
Helix 152	AQ8	B	1149	1159	Right-handed alpha
Helix 153	AQ9	B	1161	1175	Right-handed alpha
Helix 154	AR1	B	1178	1194	Right-handed alpha
Helix 155	AR2	B	1194	1200	Right-handed alpha
Helix 156	AR3	B	1202	1233	Right-handed alpha
Helix 157	AR4	B	1234	1242	Right-handed alpha
Helix 158	AR5	B	1243	1249	Right-handed alpha
Helix 159	AR6	B	1280	1297	Right-handed alpha
Helix 160	AR7	B	1300	1315	Right-handed alpha
Helix 161	AR8	B	1318	1363	Right-handed alpha
Helix 162	AR9	B	1402	1408	Right-handed alpha
Helix 163	AS1	B	1411	1415	Right-handed 310
Helix 164	AS2	B	1506	1524	Right-handed alpha
Helix 165	AS3	B	1524	1544	Right-handed alpha
Helix 166	AS4	B	1656	1669	Right-handed alpha
Helix 167	AS5	B	1672	1687	Right-handed alpha
Helix 168	AS6	B	1688	1702	Right-handed alpha
Helix 169	AS7	B	1708	1717	Right-handed alpha
Helix 170	AS8	B	1728	1748	Right-handed alpha
Helix 171	AS9	B	1771	1775	Right-handed alpha
Helix 172	AT1	B	1785	1803	Right-handed alpha
Helix 173	AT2	B	1957	1966	Right-handed alpha
Helix 174	AT3	B	1977	1994	Right-handed alpha
Helix 175	AT4	B	1995	1999	Right-handed 310
Helix 176	AT5	B	2006	2013	Right-handed alpha
Helix 177	AT6	B	2017	2041	Right-handed alpha
Helix 178	AT7	B	2043	2061	Right-handed alpha
Helix 179	AT8	B	2063	2069	Right-handed alpha
Helix 180	AT9	B	2077	2100	Right-handed alpha
Helix 181	AU1	B	2115	2128	Right-handed alpha
Helix 182	AU2	B	2130	2143	Right-handed alpha
Helix 183	AU3	B	2148	2175	Right-handed alpha
Helix 184	AU4	B	2184	2214	Right-handed alpha
Helix 185	AU5	B	2244	2246	Right-handed 310
Helix 186	AU6	B	2252	2263	Right-handed alpha
Helix 187	AU7	B	2266	2275	Right-handed alpha
Helix 188	AU8	B	2276	2279	Right-handed 310
Helix 189	AU9	B	2297	2311	Right-handed alpha
Helix 190	AV1	B	2348	2359	Right-handed alpha
Helix 191	AV2	B	2422	2424	Right-handed 310
Helix 192	AV3	B	2458	2463	Right-handed alpha
Helix 193	AV4	B	2465	2473	Right-handed alpha
Helix 194	AV5	B	2473	2484	Right-handed alpha
Helix 195	AV6	B	2489	2493	Right-handed 310
Helix 196	AV7	B	2500	2517	Right-handed alpha
Helix 197	AV8	B	2518	2535	Right-handed alpha
Helix 198	AV9	B	2535	2543	Right-handed alpha

There are 9 sheets in PDB entry 8IXO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2237	2241	first strand
Strand 2	F	2225	2232	anti-parallel
Strand 3	F	2317	2324	anti-parallel
Strand 4	F	2335	2341	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2248	2250	first strand
Strand 2	F	2281	2287	anti-parallel
Strand 3	F	2443	2449	anti-parallel
Strand 4	F	2375	2377	parallel
Strand 5	F	2385	2386	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2366	2372	first strand
Strand 2	F	2399	2409	anti-parallel
Strand 3	F	2426	2434	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2237	2241	first strand
Strand 2	A	2225	2232	anti-parallel
Strand 3	A	2317	2324	anti-parallel
Strand 4	A	2335	2341	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2248	2250	first strand
Strand 2	A	2281	2287	anti-parallel
Strand 3	A	2443	2449	anti-parallel
Strand 4	A	2375	2377	parallel
Strand 5	A	2385	2386	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2366	2372	first strand
Strand 2	A	2399	2409	anti-parallel
Strand 3	A	2426	2434	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2237	2241	first strand
Strand 2	B	2225	2232	anti-parallel
Strand 3	B	2317	2324	anti-parallel
Strand 4	B	2335	2341	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2248	2250	first strand
Strand 2	B	2281	2287	anti-parallel
Strand 3	B	2443	2449	anti-parallel
Strand 4	B	2375	2377	parallel
Strand 5	B	2385	2386	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2366	2372	first strand
Strand 2	B	2399	2409	anti-parallel
Strand 3	B	2426	2434	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8IXO

Analysis of interatomic Contacts of Structural Units in PDB entry:
8IXO