Analysis of interatomic Contacts of Structural Units in PDB entry:
8IXP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IXP entry

There are 4 chains in PDB entry 8IXP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 8SER 436
B
 GLY 8SER 436
C
 ARG 9LEU 438
D
 ARG 9SER 436
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 85 helices in PDB entry 8IXP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 38Right-handed alpha
Helix 2
AA2
A
38 49Right-handed alpha
Helix 3
AA3
A
70 83Right-handed alpha
Helix 4
AA4
A
103 125Right-handed alpha
Helix 5
AA5
A
135 138Right-handed 310
Helix 6
AA6
A
139 148Right-handed alpha
Helix 7
AA7
A
148 153Right-handed alpha
Helix 8
AA8
A
173 190Right-handed alpha
Helix 9
AA9
A
199 211Right-handed alpha
Helix 10
AB1
A
213 215Right-handed 310
Helix 11
AB2
A
228 232Right-handed 310
Helix 12
AB3
A
235 244Right-handed alpha
Helix 13
AB4
A
269 278Right-handed alpha
Helix 14
AB5
A
293 303Right-handed alpha
Helix 15
AB6
A
314 324Right-handed alpha
Helix 16
AB7
A
341 350Right-handed alpha
Helix 17
AB8
A
364 369Right-handed alpha
Helix 18
AB9
A
370 373Right-handed 310
Helix 19
AC1
A
381 395Right-handed alpha
Helix 20
AC2
A
396 415Right-handed alpha
Helix 21
AC3
A
416 436Right-handed alpha
Helix 22
AC4
B
26 38Right-handed alpha
Helix 23
AC5
B
38 49Right-handed alpha
Helix 24
AC6
B
70 83Right-handed alpha
Helix 25
AC7
B
103 125Right-handed alpha
Helix 26
AC8
B
135 138Right-handed 310
Helix 27
AC9
B
139 148Right-handed alpha
Helix 28
AD1
B
148 153Right-handed alpha
Helix 29
AD2
B
173 190Right-handed alpha
Helix 30
AD3
B
199 210Right-handed alpha
Helix 31
AD4
B
213 215Right-handed 310
Helix 32
AD5
B
228 232Right-handed 310
Helix 33
AD6
B
235 244Right-handed alpha
Helix 34
AD7
B
269 278Right-handed alpha
Helix 35
AD8
B
293 303Right-handed alpha
Helix 36
AD9
B
314 324Right-handed alpha
Helix 37
AE1
B
341 350Right-handed alpha
Helix 38
AE2
B
364 369Right-handed alpha
Helix 39
AE3
B
370 373Right-handed 310
Helix 40
AE4
B
381 394Right-handed alpha
Helix 41
AE5
B
396 415Right-handed alpha
Helix 42
AE6
B
416 435Right-handed alpha
Helix 43
AE7
C
26 38Right-handed alpha
Helix 44
AE8
C
38 49Right-handed alpha
Helix 45
AE9
C
70 84Right-handed alpha
Helix 46
AF1
C
103 124Right-handed alpha
Helix 47
AF2
C
135 138Right-handed 310
Helix 48
AF3
C
139 148Right-handed alpha
Helix 49
AF4
C
148 153Right-handed alpha
Helix 50
AF5
C
173 190Right-handed alpha
Helix 51
AF6
C
199 211Right-handed alpha
Helix 52
AF7
C
213 215Right-handed 310
Helix 53
AF8
C
228 232Right-handed 310
Helix 54
AF9
C
235 243Right-handed alpha
Helix 55
AG1
C
269 278Right-handed alpha
Helix 56
AG2
C
293 300Right-handed alpha
Helix 57
AG3
C
314 324Right-handed alpha
Helix 58
AG4
C
341 350Right-handed alpha
Helix 59
AG5
C
364 369Right-handed alpha
Helix 60
AG6
C
370 373Right-handed 310
Helix 61
AG7
C
381 394Right-handed alpha
Helix 62
AG8
C
396 415Right-handed alpha
Helix 63
AG9
C
416 438Right-handed alpha
Helix 64
AH1
D
26 38Right-handed alpha
Helix 65
AH2
D
38 49Right-handed alpha
Helix 66
AH3
D
70 84Right-handed alpha
Helix 67
AH4
D
103 124Right-handed alpha
Helix 68
AH5
D
135 138Right-handed 310
Helix 69
AH6
D
139 148Right-handed alpha
Helix 70
AH7
D
148 153Right-handed alpha
Helix 71
AH8
D
173 190Right-handed alpha
Helix 72
AH9
D
199 211Right-handed alpha
Helix 73
AI1
D
213 215Right-handed 310
Helix 74
AI2
D
228 232Right-handed 310
Helix 75
AI3
D
235 244Right-handed alpha
Helix 76
AI4
D
245 247Right-handed 310
Helix 77
AI5
D
269 278Right-handed alpha
Helix 78
AI6
D
293 303Right-handed alpha
Helix 79
AI7
D
314 324Right-handed alpha
Helix 80
AI8
D
341 350Right-handed alpha
Helix 81
AI9
D
364 369Right-handed alpha
Helix 82
AJ1
D
370 373Right-handed 310
Helix 83
AJ2
D
381 395Right-handed alpha
Helix 84
AJ3
D
396 415Right-handed alpha
Helix 85
AJ4
D
416 435Right-handed alpha
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There are 8 sheets in PDB entry 8IXP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 91first strand
Strand 2
A
52 60parallel
Strand 3
A
10 16parallel
Strand 4
A
127 133parallel
Strand 5
A
155 160parallel
Strand 6
A
193 197parallel
Strand 7
A
217 219parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
308 310first strand
Strand 2
A
283 288parallel
Strand 3
A
253 258parallel
Strand 4
A
327 332parallel
Strand 5
A
356 360parallel
Strand 6
A
376 378parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
87 91first strand
Strand 2
B
52 60parallel
Strand 3
B
10 16parallel
Strand 4
B
127 133parallel
Strand 5
B
155 160parallel
Strand 6
B
193 197parallel
Strand 7
B
217 219parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
308 311first strand
Strand 2
B
283 289parallel
Strand 3
B
253 259parallel
Strand 4
B
327 332parallel
Strand 5
B
356 360parallel
Strand 6
B
376 378parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
87 91first strand
Strand 2
C
52 60parallel
Strand 3
C
10 16parallel
Strand 4
C
127 133parallel
Strand 5
C
155 160parallel
Strand 6
C
193 197parallel
Strand 7
C
217 219parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
308 311first strand
Strand 2
C
285 289parallel
Strand 3
C
255 259parallel
Strand 4
C
329 332parallel
Strand 5
C
356 360parallel
Strand 6
C
376 378parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
87 91first strand
Strand 2
D
52 60parallel
Strand 3
D
10 16parallel
Strand 4
D
127 133parallel
Strand 5
D
155 160parallel
Strand 6
D
193 197parallel
Strand 7
D
217 219parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
308 311first strand
Strand 2
D
283 289parallel
Strand 3
D
253 258parallel
Strand 4
D
327 332parallel
Strand 5
D
356 360parallel
Strand 6
D
376 378parallel
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