Analysis of interatomic Contacts of Structural Units in PDB entry:
8IY6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IY6 entry

There are 2 chains in PDB entry 8IY6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
R
 PRO 88CYS 403
L
 CYS 1TRP 21
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 8IY6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
R
97 129Right-handed alpha
Helix 2
AA2
R
130 133Right-handed 310
Helix 3
AA3
R
134 165Right-handed alpha
Helix 4
AA4
R
170 205Right-handed alpha
Helix 5
AA5
R
219 233Right-handed alpha
Helix 6
AA6
R
233 239Right-handed alpha
Helix 7
AA7
R
263 281Right-handed alpha
Helix 8
AA8
R
282 303Right-handed alpha
Helix 9
AA9
R
319 350Right-handed alpha
Helix 10
AB1
R
357 390Right-handed alpha
Helix 11
AB2
R
390 403Right-handed alpha
Helix 12
AB3
L
8 18Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8IY6.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
240 247first strand
Strand 2
R
250 257anti-parallel
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