Analysis of interatomic Contacts of Structural Units in PDB entry:
8IZ8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IZ8 entry

There is 1 chain in PDB entry 8IZ8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 1298
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 8IZ8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 23Right-handed alpha
Helix 2
AA2
A
27 37Right-handed alpha
Helix 3
AA3
A
40 44Right-handed 310
Helix 4
AA4
A
48 51Right-handed 310
Helix 5
AA5
A
52 74Right-handed alpha
Helix 6
AA6
A
79 89Right-handed alpha
Helix 7
AA7
A
89 94Right-handed alpha
Helix 8
AA8
A
94 122Right-handed alpha
Helix 9
AA9
A
127 179Right-handed alpha
Helix 10
AB1
A
182 188Right-handed alpha
Helix 11
AB2
A
190 201Right-handed alpha
Helix 12
AB3
A
204 209Right-handed alpha
Helix 13
AB4
A
213 233Right-handed alpha
Helix 14
AB5
A
236 282Right-handed alpha
Helix 15
AB6
A
282 290Right-handed alpha
Helix 16
AB7
A
291 343Right-handed alpha
Helix 17
AB8
A
347 368Right-handed alpha
Helix 18
AB9
A
368 391Right-handed alpha
Helix 19
AC1
A
450 460Right-handed alpha
Helix 20
AC2
A
488 495Right-handed alpha
Helix 21
AC3
A
500 511Right-handed alpha
Helix 22
AC4
A
513 520Right-handed alpha
Helix 23
AC5
A
529 533Right-handed 310
Helix 24
AC6
A
536 551Right-handed alpha
Helix 25
AC7
A
566 582Right-handed alpha
Helix 26
AC8
A
594 598Right-handed 310
Helix 27
AC9
A
616 624Right-handed alpha
Helix 28
AD1
A
626 631Right-handed alpha
Helix 29
AD2
A
697 707Right-handed alpha
Helix 30
AD3
A
710 751Right-handed alpha
Helix 31
AD4
A
760 807Right-handed alpha
Helix 32
AD5
A
809 816Right-handed alpha
Helix 33
AD6
A
817 834Right-handed alpha
Helix 34
AD7
A
834 861Right-handed alpha
Helix 35
AD8
A
862 866Right-handed 310
Helix 36
AD9
A
867 910Right-handed alpha
Helix 37
AE1
A
910 917Right-handed alpha
Helix 38
AE2
A
919 970Right-handed alpha
Helix 39
AE3
A
975 987Right-handed alpha
Helix 40
AE4
A
988 1007Right-handed alpha
Helix 41
AE5
A
1007 1018Right-handed alpha
Helix 42
AE6
A
1081 1090Right-handed alpha
Helix 43
AE7
A
1110 1115Right-handed alpha
Helix 44
AE8
A
1130 1136Right-handed alpha
Helix 45
AE9
A
1142 1153Right-handed alpha
Helix 46
AF1
A
1155 1160Right-handed alpha
Helix 47
AF2
A
1171 1175Right-handed 310
Helix 48
AF3
A
1178 1194Right-handed alpha
Helix 49
AF4
A
1208 1222Right-handed alpha
Helix 50
AF5
A
1257 1263Right-handed alpha
Helix 51
AF6
A
1267 1275Right-handed alpha
Helix 52
AF7
A
1277 1297Right-handed alpha
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There are 4 sheets in PDB entry 8IZ8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
588 590first strand
Strand 2
A
441 444parallel
Strand 3
A
602 605parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
477 478first strand
Strand 2
A
557 558parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1041 1044first strand
Strand 2
A
1097 1100anti-parallel
Strand 3
A
1103 1104anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1229 1232first strand
Strand 2
A
1071 1075parallel
Strand 3
A
1244 1248parallel
Strand 4
A
1251 1256anti-parallel
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