Analysis of interatomic Contacts of Structural Units in PDB entry:
8IZ9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IZ9 entry

There is 1 chain in PDB entry 8IZ9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 7PRO 1298
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 8IZ9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 24Right-handed alpha
Helix 2
AA2
A
27 37Right-handed alpha
Helix 3
AA3
A
40 44Right-handed 310
Helix 4
AA4
A
48 51Right-handed 310
Helix 5
AA5
A
52 74Right-handed alpha
Helix 6
AA6
A
80 122Right-handed alpha
Helix 7
AA7
A
127 179Right-handed alpha
Helix 8
AA8
A
182 189Right-handed alpha
Helix 9
AA9
A
190 213Right-handed alpha
Helix 10
AB1
A
213 234Right-handed alpha
Helix 11
AB2
A
236 282Right-handed alpha
Helix 12
AB3
A
282 290Right-handed alpha
Helix 13
AB4
A
291 343Right-handed alpha
Helix 14
AB5
A
347 391Right-handed alpha
Helix 15
AB6
A
450 459Right-handed alpha
Helix 16
AB7
A
489 495Right-handed alpha
Helix 17
AB8
A
500 510Right-handed alpha
Helix 18
AB9
A
513 520Right-handed alpha
Helix 19
AC1
A
522 526Right-handed 310
Helix 20
AC2
A
536 550Right-handed alpha
Helix 21
AC3
A
566 578Right-handed alpha
Helix 22
AC4
A
581 585Right-handed 310
Helix 23
AC5
A
593 597Right-handed 310
Helix 24
AC6
A
617 622Right-handed alpha
Helix 25
AC7
A
697 709Right-handed alpha
Helix 26
AC8
A
710 751Right-handed alpha
Helix 27
AC9
A
760 807Right-handed alpha
Helix 28
AD1
A
809 816Right-handed alpha
Helix 29
AD2
A
817 861Right-handed alpha
Helix 30
AD3
A
862 866Right-handed 310
Helix 31
AD4
A
867 910Right-handed alpha
Helix 32
AD5
A
910 918Right-handed alpha
Helix 33
AD6
A
919 970Right-handed alpha
Helix 34
AD7
A
971 974Right-handed 310
Helix 35
AD8
A
975 987Right-handed alpha
Helix 36
AD9
A
991 1018Right-handed alpha
Helix 37
AE1
A
1080 1090Right-handed alpha
Helix 38
AE2
A
1130 1136Right-handed alpha
Helix 39
AE3
A
1142 1153Right-handed alpha
Helix 40
AE4
A
1155 1160Right-handed alpha
Helix 41
AE5
A
1178 1193Right-handed alpha
Helix 42
AE6
A
1208 1223Right-handed alpha
Helix 43
AE7
A
1258 1264Right-handed alpha
Helix 44
AE8
A
1267 1276Right-handed alpha
Helix 45
AE9
A
1277 1297Right-handed alpha
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There are 3 sheets in PDB entry 8IZ9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
475 477first strand
Strand 2
A
555 559parallel
Strand 3
A
586 590parallel
Strand 4
A
440 444parallel
Strand 5
A
602 605parallel
Strand 6
A
615 616anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1041 1042first strand
Strand 2
A
1099 1100anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1228 1232first strand
Strand 2
A
1070 1074parallel
Strand 3
A
1244 1247parallel
Strand 4
A
1252 1256anti-parallel
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