Analysis of interatomic Contacts of Structural Units in PDB entry:
8IZA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IZA entry

There is 1 chain in PDB entry 8IZA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 6GLY 1301
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 8IZA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 23Right-handed alpha
Helix 2
AA2
A
24 26Right-handed 310
Helix 3
AA3
A
27 37Right-handed alpha
Helix 4
AA4
A
40 44Right-handed 310
Helix 5
AA5
A
52 75Right-handed alpha
Helix 6
AA6
A
79 89Right-handed alpha
Helix 7
AA7
A
89 94Right-handed alpha
Helix 8
AA8
A
95 122Right-handed alpha
Helix 9
AA9
A
128 150Right-handed alpha
Helix 10
AB1
A
150 179Right-handed alpha
Helix 11
AB2
A
182 187Right-handed alpha
Helix 12
AB3
A
190 200Right-handed alpha
Helix 13
AB4
A
204 231Right-handed alpha
Helix 14
AB5
A
234 236Right-handed 310
Helix 15
AB6
A
237 275Right-handed alpha
Helix 16
AB7
A
276 281Right-handed alpha
Helix 17
AB8
A
282 288Right-handed alpha
Helix 18
AB9
A
291 334Right-handed alpha
Helix 19
AC1
A
335 342Right-handed alpha
Helix 20
AC2
A
348 391Right-handed alpha
Helix 21
AC3
A
450 460Right-handed alpha
Helix 22
AC4
A
489 495Right-handed alpha
Helix 23
AC5
A
500 511Right-handed alpha
Helix 24
AC6
A
513 520Right-handed alpha
Helix 25
AC7
A
522 525Right-handed 310
Helix 26
AC8
A
529 533Right-handed 310
Helix 27
AC9
A
536 551Right-handed alpha
Helix 28
AD1
A
566 578Right-handed alpha
Helix 29
AD2
A
595 599Right-handed 310
Helix 30
AD3
A
616 624Right-handed alpha
Helix 31
AD4
A
698 707Right-handed alpha
Helix 32
AD5
A
710 751Right-handed alpha
Helix 33
AD6
A
760 807Right-handed alpha
Helix 34
AD7
A
809 816Right-handed alpha
Helix 35
AD8
A
817 823Right-handed alpha
Helix 36
AD9
A
835 858Right-handed alpha
Helix 37
AE1
A
867 918Right-handed alpha
Helix 38
AE2
A
919 966Right-handed alpha
Helix 39
AE3
A
967 972Right-handed alpha
Helix 40
AE4
A
981 1015Right-handed alpha
Helix 41
AE5
A
1016 1018Right-handed 310
Helix 42
AE6
A
1080 1090Right-handed alpha
Helix 43
AE7
A
1104 1108Right-handed 310
Helix 44
AE8
A
1109 1115Right-handed alpha
Helix 45
AE9
A
1130 1136Right-handed alpha
Helix 46
AF1
A
1142 1154Right-handed alpha
Helix 47
AF2
A
1155 1160Right-handed alpha
Helix 48
AF3
A
1178 1194Right-handed alpha
Helix 49
AF4
A
1208 1223Right-handed alpha
Helix 50
AF5
A
1234 1238Right-handed 310
Helix 51
AF6
A
1257 1263Right-handed alpha
Helix 52
AF7
A
1267 1274Right-handed alpha
Helix 53
AF8
A
1278 1297Right-handed alpha
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There are 5 sheets in PDB entry 8IZA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 435first strand
Strand 2
A
410 417anti-parallel
Strand 3
A
464 471anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
475 478first strand
Strand 2
A
555 559parallel
Strand 3
A
586 590parallel
Strand 4
A
440 444parallel
Strand 5
A
602 607parallel
Strand 6
A
610 615anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
487 488first strand
Strand 2
A
527 528anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1064 1065first strand
Strand 2
A
1041 1047anti-parallel
Strand 3
A
1095 1100anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1117 1120first strand
Strand 2
A
1197 1200parallel
Strand 3
A
1227 1231parallel
Strand 4
A
1071 1074parallel
Strand 5
A
1243 1248parallel
Strand 6
A
1251 1256anti-parallel
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