Analysis of interatomic Contacts of Structural Units in PDB entry:
8IZL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IZL entry

There are 5 chains in PDB entry 8IZL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 ALA 218ASP 277
E
 ILE 216VAL 273
B
 ALA 218VAL 286
C
 SER 214GLY 304
A
 LEU 4PHE 2232
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are113 helices in PDB entry 8IZL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
218 243Right-handed alpha
Helix 2
AA2
D
244 271Right-handed alpha
Helix 3
AA3
E
217 267Right-handed alpha
Helix 4
AA4
E
268 273Right-handed alpha
Helix 5
AA5
B
219 244Right-handed alpha
Helix 6
AA6
B
246 275Right-handed alpha
Helix 7
AA7
C
215 243Right-handed alpha
Helix 8
AA8
C
244 272Right-handed alpha
Helix 9
AA9
C
285 290Right-handed alpha
Helix 10
AB1
A
19 30Right-handed alpha
Helix 11
AB2
A
37 42Right-handed alpha
Helix 12
AB3
A
43 47Right-handed 310
Helix 13
AB4
A
48 55Right-handed alpha
Helix 14
AB5
A
56 74Right-handed alpha
Helix 15
AB6
A
75 79Right-handed 310
Helix 16
AB7
A
90 98Right-handed 310
Helix 17
AB8
A
108 122Right-handed alpha
Helix 18
AB9
A
124 141Right-handed alpha
Helix 19
AC1
A
162 172Right-handed alpha
Helix 20
AC2
A
175 199Right-handed alpha
Helix 21
AC3
A
237 260Right-handed alpha
Helix 22
AC4
A
265 285Right-handed alpha
Helix 23
AC5
A
287 304Right-handed alpha
Helix 24
AC6
A
305 307Right-handed 310
Helix 25
AC7
A
309 313Right-handed 310
Helix 26
AC8
A
314 330Right-handed alpha
Helix 27
AC9
A
335 349Right-handed alpha
Helix 28
AD1
A
354 360Right-handed alpha
Helix 29
AD2
A
361 362Right-handed 310
Helix 30
AD3
A
363 367Right-handed 310
Helix 31
AD4
A
374 386Right-handed alpha
Helix 32
AD5
A
394 415Right-handed alpha
Helix 33
AD6
A
416 419Right-handed 310
Helix 34
AD7
A
430 440Right-handed alpha
Helix 35
AD8
A
444 451Right-handed alpha
Helix 36
AD9
A
451 456Right-handed alpha
Helix 37
AE1
A
467 471Right-handed 310
Helix 38
AE2
A
484 488Right-handed 310
Helix 39
AE3
A
493 504Right-handed alpha
Helix 40
AE4
A
515 522Right-handed alpha
Helix 41
AE5
A
527 537Right-handed alpha
Helix 42
AE6
A
568 585Right-handed alpha
Helix 43
AE7
A
586 590Right-handed 310
Helix 44
AE8
A
598 611Right-handed alpha
Helix 45
AE9
A
672 677Right-handed alpha
Helix 46
AF1
A
678 694Right-handed alpha
Helix 47
AF2
A
700 707Right-handed alpha
Helix 48
AF3
A
749 768Right-handed alpha
Helix 49
AF4
A
794 820Right-handed alpha
Helix 50
AF5
A
851 857Right-handed alpha
Helix 51
AF6
A
869 887Right-handed alpha
Helix 52
AF7
A
890 912Right-handed alpha
Helix 53
AF8
A
920 928Right-handed alpha
Helix 54
AF9
A
929 939Right-handed alpha
Helix 55
AG1
A
940 944Right-handed 310
Helix 56
AG2
A
951 955Right-handed 310
Helix 57
AG3
A
961 977Right-handed alpha
Helix 58
AG4
A
980 989Right-handed alpha
Helix 59
AG5
A
996 1003Right-handed alpha
Helix 60
AG6
A
1014 1031Right-handed alpha
Helix 61
AG7
A
1043 1057Right-handed alpha
Helix 62
AG8
A
1062 1072Right-handed alpha
Helix 63
AG9
A
1073 1084Right-handed alpha
Helix 64
AH1
A
1088 1099Right-handed alpha
Helix 65
AH2
A
1102 1111Right-handed alpha
Helix 66
AH3
A
1111 1122Right-handed alpha
Helix 67
AH4
A
1131 1137Right-handed 310
Helix 68
AH5
A
1142 1155Right-handed alpha
Helix 69
AH6
A
1155 1160Right-handed alpha
Helix 70
AH7
A
1171 1176Right-handed alpha
Helix 71
AH8
A
1242 1260Right-handed alpha
Helix 72
AH9
A
1262 1275Right-handed alpha
Helix 73
AI1
A
1280 1288Right-handed alpha
Helix 74
AI2
A
1317 1321Right-handed 310
Helix 75
AI3
A
1338 1358Right-handed alpha
Helix 76
AI4
A
1415 1432Right-handed alpha
Helix 77
AI5
A
1438 1459Right-handed alpha
Helix 78
AI6
A
1481 1486Right-handed alpha
Helix 79
AI7
A
1489 1512Right-handed alpha
Helix 80
AI8
A
1516 1531Right-handed alpha
Helix 81
AI9
A
1536 1545Right-handed alpha
Helix 82
AJ1
A
1545 1555Right-handed alpha
Helix 83
AJ2
A
1565 1569Right-handed 310
Helix 84
AJ3
A
1570 1593Right-handed alpha
Helix 85
AJ4
A
1610 1627Right-handed alpha
Helix 86
AJ5
A
1640 1643Right-handed 310
Helix 87
AJ6
A
1644 1657Right-handed alpha
Helix 88
AJ7
A
1665 1675Right-handed alpha
Helix 89
AJ8
A
1689 1699Right-handed alpha
Helix 90
AJ9
A
1699 1711Right-handed alpha
Helix 91
AK1
A
1775 1781Right-handed 310
Helix 92
AK2
A
1789 1801Right-handed alpha
Helix 93
AK3
A
1818 1828Right-handed alpha
Helix 94
AK4
A
1840 1844Right-handed 310
Helix 95
AK5
A
1854 1859Right-handed alpha
Helix 96
AK6
A
1860 1868Right-handed alpha
Helix 97
AK7
A
1887 1892Right-handed alpha
Helix 98
AK8
A
1895 1907Right-handed alpha
Helix 99
AK9
A
1930 1943Right-handed alpha
Helix 100
AL1
A
1958 1972Right-handed alpha
Helix 101
AL2
A
2005 2020Right-handed alpha
Helix 102
AL3
A
2025 2054Right-handed alpha
Helix 103
AL4
A
2059 2069Right-handed alpha
Helix 104
AL5
A
2074 2079Right-handed alpha
Helix 105
AL6
A
2086 2102Right-handed alpha
Helix 106
AL7
A
2102 2113Right-handed alpha
Helix 107
AL8
A
2128 2150Right-handed alpha
Helix 108
AL9
A
2155 2168Right-handed alpha
Helix 109
AM1
A
2172 2176Right-handed 310
Helix 110
AM2
A
2178 2186Right-handed alpha
Helix 111
AM3
A
2194 2206Right-handed alpha
Helix 112
AM4
A
2207 2210Right-handed 310
Helix 113
AM5
A
2214 2232Right-handed alpha
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There are 12 sheets in PDB entry 8IZL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
274 277first strand
Strand 2
A
390 393anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 88first strand
Strand 2
A
231 236parallel
Strand 3
A
221 226anti-parallel
Strand 4
A
213 217anti-parallel
Strand 5
A
206 207anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
423 424first strand
Strand 2
A
459 460anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
549 552first strand
Strand 2
A
563 566anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
780 790first strand
Strand 2
A
659 669anti-parallel
Strand 3
A
830 832anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
710 712first strand
Strand 2
A
737 739anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
835 838first strand
Strand 2
A
841 844anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1180 1182first strand
Strand 2
A
1369 1371anti-parallel
Strand 3
A
1199 1202anti-parallel
Strand 4
A
1322 1324anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1206 1207first strand
Strand 2
A
1364 1365anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1598 1601first strand
Strand 2
A
1678 1681parallel
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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1741 1745first strand
Strand 2
A
1973 1980anti-parallel
Strand 3
A
1990 1997anti-parallel
Strand 4
A
1944 1955anti-parallel
Strand 5
A
1911 1916parallel
Strand 6
A
1809 1813parallel
Strand 7
A
1832 1836parallel
Strand 8
A
1879 1880parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2170 2171first strand
Strand 2
A
2211 2212anti-parallel
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