Analysis of interatomic Contacts of Structural Units in PDB entry:
8IZP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IZP entry

There is 1 chain in PDB entry 8IZP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 202ALA 1527
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 8IZP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
207 211Right-handed 310
Helix 2
AA2
A
220 222Right-handed 310
Helix 3
AA3
A
223 233Right-handed alpha
Helix 4
AA4
A
248 273Right-handed alpha
Helix 5
AA5
A
298 324Right-handed alpha
Helix 6
AA6
A
326 336Right-handed alpha
Helix 7
AA7
A
345 368Right-handed alpha
Helix 8
AA8
A
370 379Right-handed alpha
Helix 9
AA9
A
397 404Right-handed alpha
Helix 10
AB1
A
405 410Right-handed alpha
Helix 11
AB2
A
415 424Right-handed alpha
Helix 12
AB3
A
425 427Right-handed 310
Helix 13
AB4
A
432 449Right-handed alpha
Helix 14
AB5
A
451 461Right-handed alpha
Helix 15
AB6
A
462 496Right-handed alpha
Helix 16
AB7
A
497 504Right-handed alpha
Helix 17
AB8
A
506 527Right-handed alpha
Helix 18
AB9
A
529 558Right-handed alpha
Helix 19
AC1
A
565 570Right-handed alpha
Helix 20
AC2
A
572 584Right-handed alpha
Helix 21
AC3
A
584 608Right-handed alpha
Helix 22
AC4
A
667 675Right-handed alpha
Helix 23
AC5
A
704 710Right-handed alpha
Helix 24
AC6
A
716 727Right-handed alpha
Helix 25
AC7
A
729 736Right-handed alpha
Helix 26
AC8
A
738 742Right-handed 310
Helix 27
AC9
A
752 768Right-handed alpha
Helix 28
AD1
A
782 793Right-handed alpha
Helix 29
AD2
A
814 818Right-handed 310
Helix 30
AD3
A
834 842Right-handed alpha
Helix 31
AD4
A
843 851Right-handed alpha
Helix 32
AD5
A
947 952Right-handed alpha
Helix 33
AD6
A
956 967Right-handed alpha
Helix 34
AD7
A
967 996Right-handed alpha
Helix 35
AD8
A
997 1002Right-handed alpha
Helix 36
AD9
A
1008 1031Right-handed alpha
Helix 37
AE1
A
1039 1055Right-handed alpha
Helix 38
AE2
A
1056 1063Right-handed alpha
Helix 39
AE3
A
1064 1072Right-handed alpha
Helix 40
AE4
A
1073 1082Right-handed alpha
Helix 41
AE5
A
1082 1108Right-handed alpha
Helix 42
AE6
A
1111 1164Right-handed alpha
Helix 43
AE7
A
1168 1176Right-handed alpha
Helix 44
AE8
A
1181 1195Right-handed alpha
Helix 45
AE9
A
1200 1210Right-handed alpha
Helix 46
AF1
A
1217 1221Right-handed 310
Helix 47
AF2
A
1222 1234Right-handed alpha
Helix 48
AF3
A
1235 1254Right-handed alpha
Helix 49
AF4
A
1255 1265Right-handed alpha
Helix 50
AF5
A
1283 1287Right-handed 310
Helix 51
AF6
A
1329 1337Right-handed alpha
Helix 52
AF7
A
1358 1365Right-handed alpha
Helix 53
AF8
A
1380 1385Right-handed alpha
Helix 54
AF9
A
1393 1402Right-handed alpha
Helix 55
AG1
A
1404 1411Right-handed alpha
Helix 56
AG2
A
1420 1424Right-handed 310
Helix 57
AG3
A
1427 1443Right-handed alpha
Helix 58
AG4
A
1457 1472Right-handed alpha
Helix 59
AG5
A
1506 1513Right-handed alpha
Helix 60
AG6
A
1515 1525Right-handed alpha
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There are 6 sheets in PDB entry 8IZP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
616 617first strand
Strand 2
A
679 687parallel
Strand 3
A
627 635anti-parallel
Strand 4
A
644 651anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
691 694first strand
Strand 2
A
771 775parallel
Strand 3
A
804 808parallel
Strand 4
A
657 660parallel
Strand 5
A
820 825parallel
Strand 6
A
828 833anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1306 1310first strand
Strand 2
A
1292 1296anti-parallel
Strand 3
A
1344 1346anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1320 1323first strand
Strand 2
A
1493 1497parallel
Strand 3
A
1500 1505anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1367 1368first strand
Strand 2
A
1446 1449parallel
Strand 3
A
1476 1479parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1378 1379first strand
Strand 2
A
1418 1419anti-parallel
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