Analysis of interatomic Contacts of Structural Units in PDB entry:
8IZR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IZR entry

There is 1 chain in PDB entry 8IZR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 1537
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 67 helices in PDB entry 8IZR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 7Right-handed alpha
Helix 2
AA2
A
12 18Right-handed alpha
Helix 3
AA3
A
24 30Right-handed alpha
Helix 4
AA4
A
30 43Right-handed alpha
Helix 5
AA5
A
43 55Right-handed alpha
Helix 6
AA6
A
62 68Right-handed alpha
Helix 7
AA7
A
70 91Right-handed alpha
Helix 8
AA8
A
98 122Right-handed alpha
Helix 9
AA9
A
131 157Right-handed alpha
Helix 10
AB1
A
161 184Right-handed alpha
Helix 11
AB2
A
193 197Right-handed 310
Helix 12
AB3
A
199 205Right-handed alpha
Helix 13
AB4
A
206 208Right-handed 310
Helix 14
AB5
A
209 219Right-handed alpha
Helix 15
AB6
A
230 233Right-handed 310
Helix 16
AB7
A
234 267Right-handed alpha
Helix 17
AB8
A
308 323Right-handed alpha
Helix 18
AB9
A
325 337Right-handed alpha
Helix 19
AC1
A
337 352Right-handed alpha
Helix 20
AC2
A
356 405Right-handed alpha
Helix 21
AC3
A
408 413Right-handed alpha
Helix 22
AC4
A
416 426Right-handed alpha
Helix 23
AC5
A
426 437Right-handed alpha
Helix 24
AC6
A
439 460Right-handed alpha
Helix 25
AC7
A
462 508Right-handed alpha
Helix 26
AC8
A
508 516Right-handed alpha
Helix 27
AC9
A
517 552Right-handed alpha
Helix 28
AD1
A
552 569Right-handed alpha
Helix 29
AD2
A
575 617Right-handed alpha
Helix 30
AD3
A
678 685Right-handed alpha
Helix 31
AD4
A
714 721Right-handed alpha
Helix 32
AD5
A
726 738Right-handed alpha
Helix 33
AD6
A
738 746Right-handed alpha
Helix 34
AD7
A
748 752Right-handed 310
Helix 35
AD8
A
766 778Right-handed alpha
Helix 36
AD9
A
792 805Right-handed alpha
Helix 37
AE1
A
824 828Right-handed 310
Helix 38
AE2
A
844 850Right-handed alpha
Helix 39
AE3
A
854 861Right-handed alpha
Helix 40
AE4
A
964 975Right-handed alpha
Helix 41
AE5
A
975 1011Right-handed alpha
Helix 42
AE6
A
1016 1067Right-handed alpha
Helix 43
AE7
A
1068 1075Right-handed alpha
Helix 44
AE8
A
1076 1084Right-handed alpha
Helix 45
AE9
A
1085 1094Right-handed alpha
Helix 46
AF1
A
1094 1120Right-handed alpha
Helix 47
AF2
A
1123 1169Right-handed alpha
Helix 48
AF3
A
1169 1176Right-handed alpha
Helix 49
AF4
A
1178 1229Right-handed alpha
Helix 50
AF5
A
1234 1247Right-handed alpha
Helix 51
AF6
A
1247 1266Right-handed alpha
Helix 52
AF7
A
1266 1277Right-handed alpha
Helix 53
AF8
A
1293 1298Right-handed 310
Helix 54
AF9
A
1339 1348Right-handed alpha
Helix 55
AG1
A
1364 1368Right-handed 310
Helix 56
AG2
A
1369 1377Right-handed alpha
Helix 57
AG3
A
1390 1396Right-handed alpha
Helix 58
AG4
A
1402 1413Right-handed alpha
Helix 59
AG5
A
1415 1422Right-handed alpha
Helix 60
AG6
A
1424 1428Right-handed 310
Helix 61
AG7
A
1431 1435Right-handed 310
Helix 62
AG8
A
1438 1454Right-handed alpha
Helix 63
AG9
A
1463 1466Right-handed 310
Helix 64
AH1
A
1468 1482Right-handed alpha
Helix 65
AH2
A
1494 1500Right-handed alpha
Helix 66
AH3
A
1517 1524Right-handed alpha
Helix 67
AH4
A
1526 1535Right-handed alpha
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There are 6 sheets in PDB entry 8IZR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
627 629first strand
Strand 2
A
695 697parallel
Strand 3
A
637 639anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
654 657first strand
Strand 2
A
642 645anti-parallel
Strand 3
A
689 690anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
701 704first strand
Strand 2
A
781 785parallel
Strand 3
A
814 818parallel
Strand 4
A
667 669parallel
Strand 5
A
830 835parallel
Strand 6
A
838 841anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1300 1301first strand
Strand 2
A
1323 1324anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1305 1308first strand
Strand 2
A
1315 1320anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1378 1379first strand
Strand 2
A
1458 1461parallel
Strand 3
A
1489 1491parallel
Strand 4
A
1330 1332parallel
Strand 5
A
1503 1504parallel
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