Analysis of interatomic Contacts of Structural Units in PDB entry:
8IZR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IZR entry

There is 1 chain in PDB entry 8IZR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 3GLY 1516
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 8IZR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 18Right-handed alpha
Helix 2
AA2
A
24 29Right-handed alpha
Helix 3
AA3
A
30 43Right-handed alpha
Helix 4
AA4
A
43 54Right-handed alpha
Helix 5
AA5
A
62 92Right-handed alpha
Helix 6
AA6
A
97 121Right-handed alpha
Helix 7
AA7
A
129 157Right-handed alpha
Helix 8
AA8
A
161 183Right-handed alpha
Helix 9
AA9
A
199 206Right-handed alpha
Helix 10
AB1
A
209 219Right-handed alpha
Helix 11
AB2
A
234 262Right-handed alpha
Helix 12
AB3
A
309 318Right-handed alpha
Helix 13
AB4
A
319 337Right-handed alpha
Helix 14
AB5
A
337 352Right-handed alpha
Helix 15
AB6
A
356 407Right-handed alpha
Helix 16
AB7
A
408 413Right-handed alpha
Helix 17
AB8
A
416 424Right-handed alpha
Helix 18
AB9
A
426 437Right-handed alpha
Helix 19
AC1
A
439 459Right-handed alpha
Helix 20
AC2
A
460 508Right-handed alpha
Helix 21
AC3
A
508 516Right-handed alpha
Helix 22
AC4
A
517 569Right-handed alpha
Helix 23
AC5
A
575 618Right-handed alpha
Helix 24
AC6
A
678 686Right-handed alpha
Helix 25
AC7
A
714 720Right-handed alpha
Helix 26
AC8
A
726 737Right-handed alpha
Helix 27
AC9
A
738 746Right-handed alpha
Helix 28
AD1
A
748 752Right-handed 310
Helix 29
AD2
A
762 778Right-handed alpha
Helix 30
AD3
A
792 803Right-handed alpha
Helix 31
AD4
A
808 812Right-handed 310
Helix 32
AD5
A
844 850Right-handed alpha
Helix 33
AD6
A
854 861Right-handed alpha
Helix 34
AD7
A
963 975Right-handed alpha
Helix 35
AD8
A
975 1010Right-handed alpha
Helix 36
AD9
A
1011 1015Right-handed 310
Helix 37
AE1
A
1016 1066Right-handed alpha
Helix 38
AE2
A
1068 1075Right-handed alpha
Helix 39
AE3
A
1076 1093Right-handed alpha
Helix 40
AE4
A
1093 1120Right-handed alpha
Helix 41
AE5
A
1122 1169Right-handed alpha
Helix 42
AE6
A
1169 1176Right-handed alpha
Helix 43
AE7
A
1178 1229Right-handed alpha
Helix 44
AE8
A
1234 1246Right-handed alpha
Helix 45
AE9
A
1247 1276Right-handed alpha
Helix 46
AF1
A
1293 1298Right-handed alpha
Helix 47
AF2
A
1340 1349Right-handed alpha
Helix 48
AF3
A
1364 1368Right-handed 310
Helix 49
AF4
A
1369 1376Right-handed alpha
Helix 50
AF5
A
1391 1396Right-handed alpha
Helix 51
AF6
A
1402 1413Right-handed alpha
Helix 52
AF7
A
1431 1435Right-handed 310
Helix 53
AF8
A
1438 1454Right-handed alpha
Helix 54
AF9
A
1469 1482Right-handed alpha
Helix 55
AG1
A
1494 1499Right-handed alpha
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There are 6 sheets in PDB entry 8IZR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
628 629first strand
Strand 2
A
695 697parallel
Strand 3
A
637 639anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
644 645first strand
Strand 2
A
689 690anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
667 669first strand
Strand 2
A
814 818parallel
Strand 3
A
781 785parallel
Strand 4
A
701 704parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
834 835first strand
Strand 2
A
838 839anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1378 1379first strand
Strand 2
A
1458 1459parallel
Strand 3
A
1488 1491parallel
Strand 4
A
1330 1332parallel
Strand 5
A
1503 1504parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1389 1390first strand
Strand 2
A
1429 1430anti-parallel
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