Analysis of interatomic Contacts of Structural Units in PDB entry:
8J2X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8J2X entry

There is 1 chain in PDB entry 8J2X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 6HIS 346
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 8J2X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 23Right-handed alpha
Helix 2
AA2
A
24 38Right-handed alpha
Helix 3
AA3
A
41 49Right-handed alpha
Helix 4
AA4
A
49 63Right-handed alpha
Helix 5
AA5
A
67 90Right-handed alpha
Helix 6
AA6
A
108 122Right-handed alpha
Helix 7
AA7
A
134 146Right-handed alpha
Helix 8
AA8
A
156 158Right-handed 310
Helix 9
AA9
A
159 172Right-handed alpha
Helix 10
AB1
A
181 187Right-handed 310
Helix 11
AB2
A
188 195Right-handed alpha
Helix 12
AB3
A
202 211Right-handed alpha
Helix 13
AB4
A
228 237Right-handed alpha
Helix 14
AB5
A
237 253Right-handed alpha
Helix 15
AB6
A
254 259Right-handed 310
Helix 16
AB7
A
260 284Right-handed alpha
Helix 17
AB8
A
286 303Right-handed alpha
Helix 18
AB9
A
308 322Right-handed alpha
Helix 19
AC1
A
325 346Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8J2X.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 133first strand
Strand 2
A
96 103parallel
Strand 3
A
149 153parallel
Strand 4
A
177 180parallel
Strand 5
A
198 199parallel
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