Analysis of interatomic Contacts of Structural Units in PDB entry:
8J74


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8J74 entry

There are 2 chains in PDB entry 8J74 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 3VAL 517
B
 PHE 3VAL 517
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 8J74. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 29Right-handed alpha
Helix 2
AA2
A
37 45Right-handed alpha
Helix 3
AA3
A
46 48Right-handed 310
Helix 4
AA4
A
50 63Right-handed alpha
Helix 5
AA5
A
65 77Right-handed alpha
Helix 6
AA6
A
86 102Right-handed alpha
Helix 7
AA7
A
103 109Right-handed alpha
Helix 8
AA8
A
114 122Right-handed alpha
Helix 9
AA9
A
123 130Right-handed alpha
Helix 10
AB1
A
130 157Right-handed alpha
Helix 11
AB2
A
160 179Right-handed alpha
Helix 12
AB3
A
180 200Right-handed alpha
Helix 13
AB4
A
202 208Right-handed alpha
Helix 14
AB5
A
233 235Right-handed 310
Helix 15
AB6
A
236 250Right-handed alpha
Helix 16
AB7
A
254 262Right-handed alpha
Helix 17
AB8
A
266 297Right-handed alpha
Helix 18
AB9
A
309 314Right-handed alpha
Helix 19
AC1
A
315 318Right-handed 310
Helix 20
AC2
A
319 327Right-handed alpha
Helix 21
AC3
A
329 363Right-handed alpha
Helix 22
AC4
A
373 399Right-handed alpha
Helix 23
AC5
A
401 426Right-handed alpha
Helix 24
AC6
A
431 448Right-handed alpha
Helix 25
AC7
A
478 505Right-handed alpha
Helix 26
AC8
A
508 512Right-handed 310
Helix 27
AC9
B
4 29Right-handed alpha
Helix 28
AD1
B
37 45Right-handed alpha
Helix 29
AD2
B
46 48Right-handed 310
Helix 30
AD3
B
50 63Right-handed alpha
Helix 31
AD4
B
65 77Right-handed alpha
Helix 32
AD5
B
86 102Right-handed alpha
Helix 33
AD6
B
103 109Right-handed alpha
Helix 34
AD7
B
114 122Right-handed alpha
Helix 35
AD8
B
123 130Right-handed alpha
Helix 36
AD9
B
130 157Right-handed alpha
Helix 37
AE1
B
160 179Right-handed alpha
Helix 38
AE2
B
180 200Right-handed alpha
Helix 39
AE3
B
202 208Right-handed alpha
Helix 40
AE4
B
233 235Right-handed 310
Helix 41
AE5
B
236 250Right-handed alpha
Helix 42
AE6
B
254 262Right-handed alpha
Helix 43
AE7
B
266 297Right-handed alpha
Helix 44
AE8
B
309 314Right-handed alpha
Helix 45
AE9
B
315 318Right-handed 310
Helix 46
AF1
B
319 327Right-handed alpha
Helix 47
AF2
B
329 363Right-handed alpha
Helix 48
AF3
B
373 399Right-handed alpha
Helix 49
AF4
B
401 426Right-handed alpha
Helix 50
AF5
B
431 448Right-handed alpha
Helix 51
AF6
B
478 505Right-handed alpha
Helix 52
AF7
B
508 512Right-handed 310
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There are 2 sheets in PDB entry 8J74. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
466 467first strand
Strand 2
A
473 474anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
466 467first strand
Strand 2
B
473 474anti-parallel
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