Analysis of interatomic Contacts of Structural Units in PDB entry:
8J77


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8J77 entry

There is 1 chain in PDB entry 8J77 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 3VAL 517
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 8J77. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 28Right-handed alpha
Helix 2
AA2
A
49 63Right-handed alpha
Helix 3
AA3
A
66 77Right-handed alpha
Helix 4
AA4
A
81 84Right-handed 310
Helix 5
AA5
A
85 103Right-handed alpha
Helix 6
AA6
A
104 107Right-handed 310
Helix 7
AA7
A
114 122Right-handed alpha
Helix 8
AA8
A
125 158Right-handed alpha
Helix 9
AA9
A
161 179Right-handed alpha
Helix 10
AB1
A
187 201Right-handed alpha
Helix 11
AB2
A
216 220Right-handed 310
Helix 12
AB3
A
233 235Right-handed 310
Helix 13
AB4
A
236 251Right-handed alpha
Helix 14
AB5
A
254 263Right-handed alpha
Helix 15
AB6
A
266 298Right-handed alpha
Helix 16
AB7
A
315 317Right-handed 310
Helix 17
AB8
A
318 327Right-handed alpha
Helix 18
AB9
A
329 367Right-handed alpha
Helix 19
AC1
A
375 397Right-handed alpha
Helix 20
AC2
A
402 417Right-handed alpha
Helix 21
AC3
A
417 426Right-handed alpha
Helix 22
AC4
A
431 448Right-handed alpha
Helix 23
AC5
A
479 502Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8J77.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
466 467first strand
Strand 2
A
473 474anti-parallel
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