Analysis of interatomic Contacts of Structural Units in PDB entry:
8J7M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8J7M entry

There are 4 chains in PDB entry 8J7M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 61GLU 356
D
 PRO 61GLU 356
B
 PRO 61GLU 356
C
 PRO 61GLU 356
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 8J7M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
72 81Right-handed alpha
Helix 2
AA2
A
82 107Right-handed alpha
Helix 3
AA3
A
114 140Right-handed alpha
Helix 4
AA4
A
148 172Right-handed alpha
Helix 5
AA5
A
176 191Right-handed 310
Helix 6
AA6
A
192 197Right-handed alpha
Helix 7
AA7
A
197 237Right-handed alpha
Helix 8
AA8
A
283 288Right-handed alpha
Helix 9
AA9
A
290 303Right-handed alpha
Helix 10
AB1
A
306 310Right-handed 310
Helix 11
AB2
A
312 318Right-handed alpha
Helix 12
AB3
A
324 337Right-handed alpha
Helix 13
AB4
A
337 356Right-handed alpha
Helix 14
AB5
D
72 81Right-handed alpha
Helix 15
AB6
D
82 107Right-handed alpha
Helix 16
AB7
D
114 140Right-handed alpha
Helix 17
AB8
D
148 172Right-handed alpha
Helix 18
AB9
D
176 191Right-handed 310
Helix 19
AC1
D
192 197Right-handed alpha
Helix 20
AC2
D
197 237Right-handed alpha
Helix 21
AC3
D
282 288Right-handed alpha
Helix 22
AC4
D
290 303Right-handed alpha
Helix 23
AC5
D
312 318Right-handed alpha
Helix 24
AC6
D
324 337Right-handed alpha
Helix 25
AC7
D
339 356Right-handed alpha
Helix 26
AC8
B
72 81Right-handed alpha
Helix 27
AC9
B
82 107Right-handed alpha
Helix 28
AD1
B
114 140Right-handed alpha
Helix 29
AD2
B
148 172Right-handed alpha
Helix 30
AD3
B
176 191Right-handed 310
Helix 31
AD4
B
192 197Right-handed alpha
Helix 32
AD5
B
197 237Right-handed alpha
Helix 33
AD6
B
283 288Right-handed alpha
Helix 34
AD7
B
290 303Right-handed alpha
Helix 35
AD8
B
306 310Right-handed 310
Helix 36
AD9
B
312 318Right-handed alpha
Helix 37
AE1
B
324 339Right-handed alpha
Helix 38
AE2
B
340 356Right-handed alpha
Helix 39
AE3
C
72 81Right-handed alpha
Helix 40
AE4
C
82 107Right-handed alpha
Helix 41
AE5
C
114 140Right-handed alpha
Helix 42
AE6
C
148 172Right-handed alpha
Helix 43
AE7
C
176 191Right-handed 310
Helix 44
AE8
C
192 197Right-handed alpha
Helix 45
AE9
C
197 236Right-handed alpha
Helix 46
AF1
C
237 239Right-handed 310
Helix 47
AF2
C
282 288Right-handed alpha
Helix 48
AF3
C
290 303Right-handed alpha
Helix 49
AF4
C
306 310Right-handed 310
Helix 50
AF5
C
312 318Right-handed alpha
Helix 51
AF6
C
324 337Right-handed alpha
Helix 52
AF7
C
337 356Right-handed alpha
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There are no sheets in PDB entry 8J7M
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