Analysis of interatomic Contacts of Structural Units in PDB entry:
8J8E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8J8E entry

There are 2 chains in PDB entry 8J8E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 3LEU 583
I
 HIS 3LEU 583
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 8J8E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 15Right-handed alpha
Helix 2
AA2
A
15 31Right-handed alpha
Helix 3
AA3
A
35 56Right-handed alpha
Helix 4
AA4
A
65 76Right-handed alpha
Helix 5
AA5
A
79 85Right-handed alpha
Helix 6
AA6
A
86 93Right-handed 310
Helix 7
AA7
A
94 105Right-handed alpha
Helix 8
AA8
A
119 130Right-handed alpha
Helix 9
AA9
A
130 146Right-handed alpha
Helix 10
AB1
A
150 169Right-handed alpha
Helix 11
AB2
A
173 206Right-handed alpha
Helix 12
AB3
A
207 223Right-handed alpha
Helix 13
AB4
A
227 247Right-handed alpha
Helix 14
AB5
A
249 267Right-handed alpha
Helix 15
AB6
A
268 271Right-handed 310
Helix 16
AB7
A
275 280Right-handed alpha
Helix 17
AB8
A
282 293Right-handed alpha
Helix 18
AB9
A
305 310Right-handed alpha
Helix 19
AC1
A
315 322Right-handed alpha
Helix 20
AC2
A
322 337Right-handed alpha
Helix 21
AC3
A
342 361Right-handed alpha
Helix 22
AC4
A
365 371Right-handed alpha
Helix 23
AC5
A
372 376Right-handed 310
Helix 24
AC6
A
377 398Right-handed alpha
Helix 25
AC7
A
399 415Right-handed alpha
Helix 26
AC8
A
419 439Right-handed alpha
Helix 27
AC9
A
440 443Right-handed 310
Helix 28
AD1
A
444 467Right-handed alpha
Helix 29
AD2
A
470 478Right-handed alpha
Helix 30
AD3
A
483 490Right-handed alpha
Helix 31
AD4
A
503 508Right-handed alpha
Helix 32
AD5
A
511 516Right-handed alpha
Helix 33
AD6
A
517 536Right-handed alpha
Helix 34
AD7
A
542 560Right-handed alpha
Helix 35
AD8
A
563 583Right-handed alpha
Helix 36
AD9
I
5 15Right-handed alpha
Helix 37
AE1
I
15 31Right-handed alpha
Helix 38
AE2
I
35 56Right-handed alpha
Helix 39
AE3
I
65 77Right-handed alpha
Helix 40
AE4
I
79 84Right-handed alpha
Helix 41
AE5
I
86 93Right-handed 310
Helix 42
AE6
I
94 105Right-handed alpha
Helix 43
AE7
I
119 130Right-handed alpha
Helix 44
AE8
I
130 146Right-handed alpha
Helix 45
AE9
I
150 169Right-handed alpha
Helix 46
AF1
I
173 223Right-handed alpha
Helix 47
AF2
I
227 247Right-handed alpha
Helix 48
AF3
I
249 267Right-handed alpha
Helix 49
AF4
I
268 271Right-handed 310
Helix 50
AF5
I
277 281Right-handed 310
Helix 51
AF6
I
282 292Right-handed alpha
Helix 52
AF7
I
305 310Right-handed alpha
Helix 53
AF8
I
314 322Right-handed alpha
Helix 54
AF9
I
322 338Right-handed alpha
Helix 55
AG1
I
342 363Right-handed alpha
Helix 56
AG2
I
372 398Right-handed alpha
Helix 57
AG3
I
399 415Right-handed alpha
Helix 58
AG4
I
419 440Right-handed alpha
Helix 59
AG5
I
441 466Right-handed alpha
Helix 60
AG6
I
470 479Right-handed alpha
Helix 61
AG7
I
483 491Right-handed alpha
Helix 62
AG8
I
503 508Right-handed alpha
Helix 63
AG9
I
510 514Right-handed 310
Helix 64
AH1
I
517 536Right-handed alpha
Helix 65
AH2
I
540 561Right-handed alpha
Helix 66
AH3
I
563 577Right-handed alpha
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There are no sheets in PDB entry 8J8E
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