Analysis of interatomic Contacts of Structural Units in PDB entry:
8JAT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8JAT entry

There is 1 chain in PDB entry 8JAT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 31ASP 271
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 8JAT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
45 59Right-handed alpha
Helix 2
AA2
A
68 83Right-handed alpha
Helix 3
AA3
A
98 109Right-handed alpha
Helix 4
AA4
A
137 149Right-handed alpha
Helix 5
AA5
A
149 167Right-handed alpha
Helix 6
AA6
A
190 208Right-handed alpha
Helix 7
AA7
A
250 264Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8JAT.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 93first strand
Strand 2
A
61 66parallel
Strand 3
A
37 41parallel
Strand 4
A
120 123parallel
Strand 5
A
171 175parallel
Strand 6
A
214 218parallel
Strand 7
A
268 269parallel
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