Analysis of interatomic Contacts of Structural Units in PDB entry:
8JCT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8JCT entry

There is 1 chain in PDB entry 8JCT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 5GLU 193
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 8JCT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 49Right-handed alpha
Helix 2
AA2
A
65 71Right-handed 310
Helix 3
AA3
A
76 94Right-handed alpha
Helix 4
AA4
A
105 116Right-handed alpha
Helix 5
AA5
A
119 124Right-handed alpha
Helix 6
AA6
A
148 150Right-handed 310
Helix 7
AA7
A
160 165Right-handed 310
Helix 8
AA8
A
175 178Right-handed 310
Helix 9
AA9
A
179 191Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8JCT.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 57first strand
Strand 2
A
19 24parallel
Strand 3
A
98 104parallel
Strand 4
A
126 132parallel
Strand 5
A
152 155parallel
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