Analysis of interatomic Contacts of Structural Units in PDB entry:
8JEW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8JEW entry

There is 1 chain in PDB entry 8JEW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 31LYS 569
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 8JEW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 60Right-handed alpha
Helix 2
AA2
A
60 70Right-handed alpha
Helix 3
AA3
A
75 101Right-handed alpha
Helix 4
AA4
A
111 123Right-handed alpha
Helix 5
AA5
A
124 128Right-handed 310
Helix 6
AA6
A
131 136Right-handed alpha
Helix 7
AA7
A
145 173Right-handed alpha
Helix 8
AA8
A
175 180Right-handed alpha
Helix 9
AA9
A
184 198Right-handed alpha
Helix 10
AB1
A
199 208Right-handed alpha
Helix 11
AB2
A
210 227Right-handed alpha
Helix 12
AB3
A
255 274Right-handed alpha
Helix 13
AB4
A
285 289Right-handed 310
Helix 14
AB5
A
317 346Right-handed alpha
Helix 15
AB6
A
352 374Right-handed alpha
Helix 16
AB7
A
382 393Right-handed alpha
Helix 17
AB8
A
396 413Right-handed alpha
Helix 18
AB9
A
413 421Right-handed alpha
Helix 19
AC1
A
424 445Right-handed alpha
Helix 20
AC2
A
446 450Right-handed 310
Helix 21
AC3
A
454 478Right-handed alpha
Helix 22
AC4
A
479 482Right-handed 310
Helix 23
AC5
A
486 498Right-handed alpha
Helix 24
AC6
A
499 515Right-handed alpha
Helix 25
AC7
A
541 545Right-handed 310
Helix 26
AC8
A
549 554Right-handed alpha
Helix 27
AC9
A
556 561Right-handed 310
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There is 1 sheet (AA1) in PDB entry 8JEW.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 110first strand
Strand 2
A
379 381anti-parallel
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