Analysis of interatomic Contacts of Structural Units in PDB entry:
8JF1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8JF1 entry

There is 1 chain in PDB entry 8JF1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 30PHE 571
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 8JF1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 60Right-handed alpha
Helix 2
AA2
A
60 70Right-handed alpha
Helix 3
AA3
A
75 101Right-handed alpha
Helix 4
AA4
A
111 124Right-handed alpha
Helix 5
AA5
A
125 128Right-handed 310
Helix 6
AA6
A
131 136Right-handed alpha
Helix 7
AA7
A
145 174Right-handed alpha
Helix 8
AA8
A
174 179Right-handed alpha
Helix 9
AA9
A
184 206Right-handed alpha
Helix 10
AB1
A
210 231Right-handed alpha
Helix 11
AB2
A
250 254Right-handed 310
Helix 12
AB3
A
255 274Right-handed alpha
Helix 13
AB4
A
295 300Right-handed alpha
Helix 14
AB5
A
317 347Right-handed alpha
Helix 15
AB6
A
352 374Right-handed alpha
Helix 16
AB7
A
383 393Right-handed alpha
Helix 17
AB8
A
396 411Right-handed alpha
Helix 18
AB9
A
413 422Right-handed alpha
Helix 19
AC1
A
424 426Right-handed 310
Helix 20
AC2
A
427 445Right-handed alpha
Helix 21
AC3
A
446 449Right-handed 310
Helix 22
AC4
A
454 478Right-handed alpha
Helix 23
AC5
A
491 497Right-handed alpha
Helix 24
AC6
A
499 515Right-handed alpha
Helix 25
AC7
A
518 523Right-handed alpha
Helix 26
AC8
A
523 528Right-handed alpha
Helix 27
AC9
A
540 545Right-handed 310
Helix 28
AD1
A
549 556Right-handed alpha
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There are no sheets in PDB entry 8JF1
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