Analysis of interatomic Contacts of Structural Units in PDB entry:
8JH0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8JH0 entry

There are 2 chains in PDB entry 8JH0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 8SER 269
B
 ASN 6LYS 270
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 8JH0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 17Right-handed alpha
Helix 2
AA2
A
20 48Right-handed alpha
Helix 3
AA3
A
53 55Right-handed 310
Helix 4
AA4
A
56 84Right-handed alpha
Helix 5
AA5
A
105 127Right-handed alpha
Helix 6
AA6
A
133 157Right-handed alpha
Helix 7
AA7
A
162 193Right-handed alpha
Helix 8
AA8
A
196 222Right-handed alpha
Helix 9
AA9
A
235 254Right-handed alpha
Helix 10
AB1
A
254 268Right-handed alpha
Helix 11
AB2
B
8 17Right-handed alpha
Helix 12
AB3
B
20 49Right-handed alpha
Helix 13
AB4
B
50 52Right-handed 310
Helix 14
AB5
B
53 55Right-handed 310
Helix 15
AB6
B
56 84Right-handed alpha
Helix 16
AB7
B
101 104Right-handed 310
Helix 17
AB8
B
105 127Right-handed alpha
Helix 18
AB9
B
133 156Right-handed alpha
Helix 19
AC1
B
157 159Right-handed 310
Helix 20
AC2
B
162 192Right-handed alpha
Helix 21
AC3
B
196 222Right-handed alpha
Helix 22
AC4
B
222 227Right-handed alpha
Helix 23
AC5
B
235 269Right-handed alpha
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There are 2 sheets in PDB entry 8JH0. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 88first strand
Strand 2
A
93 96anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 88first strand
Strand 2
B
93 96anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il