Analysis of interatomic Contacts of Structural Units in PDB entry:
8JH8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8JH8 entry

There is 1 chain in PDB entry 8JH8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1PHE 242
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 8JH8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
53 58Right-handed alpha
Helix 2
AA2
A
60 64Right-handed 310
Helix 3
AA3
A
79 83Right-handed 310
Helix 4
AA4
A
86 88Right-handed 310
Helix 5
AA5
A
89 106Right-handed alpha
Helix 6
AA6
A
119 132Right-handed alpha
Helix 7
AA7
A
171 186Right-handed alpha
Helix 8
AA8
A
229 240Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8JH8.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 20first strand
Strand 2
A
23 30anti-parallel
Strand 3
A
72 77anti-parallel
Strand 4
A
41 47parallel
Strand 5
A
108 118parallel
Strand 6
A
138 142parallel
Strand 7
A
158 164parallel
Strand 8
A
215 220parallel
Strand 9
A
203 206anti-parallel
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