Analysis of interatomic Contacts of Structural Units in PDB entry:
8JHZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8JHZ entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 3 chains in PDB entry 8JHZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 2ASN 516
A
LEU 518ILE 2616
B
GLY 142GLY 492
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 69 helices in PDB entry 8JHZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
5 13Right-handed alpha
Helix 2
AA2
A
20 35Right-handed alpha
Helix 3
AA3
A
40 62Right-handed alpha
Helix 4
AA4
A
67 87Right-handed alpha
Helix 5
AA5
A
107 121Right-handed alpha
Helix 6
AA6
A
136 156Right-handed alpha
Helix 7
AA7
A
166 194Right-handed alpha
Helix 8
AA8
A
200 213Right-handed alpha
Helix 9
AA9
A
216 234Right-handed alpha
Helix 10
AB1
A
240 243Right-handed 310
Helix 11
AB2
A
247 259Right-handed alpha
Helix 12
AB3
A
263 280Right-handed alpha
Helix 13
AB4
A
307 324Right-handed alpha
Helix 14
AB5
A
333 337Right-handed 310
Helix 15
AB6
A
338 351Right-handed alpha
Helix 16
AB7
A
354 358Right-handed 310
Helix 17
AB8
A
392 419Right-handed alpha
Helix 18
AB9
A
422 436Right-handed alpha
Helix 19
AC1
A
442 450Right-handed alpha
Helix 20
AC2
A
451 455Right-handed 310
Helix 21
AC3
A
462 468Right-handed alpha
Helix 22
AC4
A
469 482Right-handed alpha
Helix 23
AC5
A
493 498Right-handed alpha
Helix 24
AC6
A
499 501Right-handed 310
Helix 25
AC7
A
503 505Right-handed 310
Helix 26
AC8
A
511 519Right-handed alpha
Helix 27
AC9
A
522 539Right-handed alpha
Helix 28
AD1
A
557 564Right-handed alpha
Helix 29
AD2
A
589 603Right-handed alpha
Helix 30
AD3
A
614 618Right-handed 310
Helix 31
AD4
A
639 643Right-handed 310
Helix 32
AD5
A
669 685Right-handed alpha
Helix 33
AD6
A
708 711Right-handed 310
Helix 34
AD7
A
712 729Right-handed alpha
Helix 35
AD8
A
733 735Right-handed 310
Helix 36
AD9
A
766 776Right-handed alpha
Helix 37
AE1
A
795 812Right-handed alpha
Helix 38
AE2
A
816 840Right-handed alpha
Helix 39
AE3
A
848 878Right-handed alpha
Helix 40
AE4
A
918 935Right-handed alpha
Helix 41
AE5
A
953 973Right-handed alpha
Helix 42
AE6
A
982 997Right-handed alpha
Helix 43
AE7
A
999 1003Right-handed 310
Helix 44
AE8
A
1005 1019Right-handed alpha
Helix 45
AE9
A
1043 1051Right-handed alpha
Helix 46
AF1
A
1055 1066Right-handed alpha
Helix 47
AF2
A
1074 1092Right-handed alpha
Helix 48
AF3
A
1118 1136Right-handed alpha
Helix 49
AF4
A
1204 1209Right-handed alpha
Helix 50
AF5
A
1247 1260Right-handed alpha
Helix 51
AF6
A
1306 1312Right-handed alpha
Helix 52
AF7
A
1349 1353Right-handed alpha
Helix 53
AF8
A
1433 1440Right-handed alpha
Helix 54
AF9
A
1440 1451Right-handed alpha
Helix 55
AG1
A
1531 1533Right-handed 310
Helix 56
AG2
A
1558 1572Right-handed alpha
Helix 57
AG3
A
1578 1589Right-handed alpha
Helix 58
AG4
A
1590 1595Right-handed 310
Helix 59
AG5
A
1648 1650Right-handed 310
Helix 60
AG6
A
1733 1735Right-handed 310
Helix 61
AG7
A
1771 1777Right-handed alpha
Helix 62
AG8
A
1790 1797Right-handed alpha
Helix 63
AG9
A
1804 1808Right-handed 310
Helix 64
AH1
B
177 188Right-handed alpha
Helix 65
AH2
B
220 225Right-handed alpha
Helix 66
AH3
B
294 299Right-handed alpha
Helix 67
AH4
B
316 320Right-handed 310
Helix 68
AH5
B
406 411Right-handed alpha
Helix 69
AH6
B
477 492Right-handed alpha
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There are 56 sheets in PDB entry 8JHZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
91 92first strand
Strand 2
A
366 367anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
236 238first strand
Strand 2
A
125 130parallel
Strand 3
A
96 100parallel
Strand 4
A
281 284parallel
Strand 5
A
380 388anti-parallel
Strand 6
A
373 377anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
289 290first strand
Strand 2
A
507 508anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
630 633first strand
Strand 2
A
620 623anti-parallel
Strand 3
A
607 611anti-parallel
Strand 4
A
579 585parallel
Strand 5
A
647 653parallel
Strand 6
A
692 698parallel
Strand 7
A
737 742parallel
Strand 8
A
779 783anti-parallel
Strand 9
A
788 791anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
746 748first strand
Strand 2
A
754 757anti-parallel
Strand 3
A
763 764anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
884 894first strand
Strand 2
A
897 904anti-parallel
Strand 3
A
910 915anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
938 939first strand
Strand 2
A
947 948anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1037 1038first strand
Strand 2
A
1041 1042anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1138 1141first strand
Strand 2
A
1145 1148anti-parallel
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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1163 1166first strand
Strand 2
A
1154 1158anti-parallel
Strand 3
A
1286 1291parallel
Strand 4
A
1313 1318parallel
Strand 5
A
1334 1339parallel
Strand 6
A
1389 1394parallel
Strand 7
A
1382 1384anti-parallel
Strand 8
A
1377 1379anti-parallel
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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1181 1183first strand
Strand 2
A
1186 1188anti-parallel
Strand 3
A
1267 1269parallel
Strand 4
A
1273 1283anti-parallel
Strand 5
A
1230 1238anti-parallel
Strand 6
A
1169 1171parallel
Strand 7
A
1202 1203anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1174 1175first strand
Strand 2
A
1194 1195anti-parallel
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There are 12 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1221 1223first strand
Strand 2
A
1297 1300parallel
Strand 3
A
1323 1327parallel
Strand 4
A
1344 1348parallel
Strand 5
A
1402 1408parallel
Strand 6
A
1414 1420anti-parallel
Strand 7
A
1425 1431anti-parallel
Strand 8
A
1457 1463parallel
Strand 9
A
1469 1475anti-parallel
Strand 10
A
1480 1487anti-parallel
Strand 11
A
1490 1497anti-parallel
Strand 12
A
1501 1505anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1354 1359first strand
Strand 2
A
1362 1368anti-parallel
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There are 14 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1511 1517first strand
Strand 2
A
1522 1529anti-parallel
Strand 3
A
1537 1546anti-parallel
Strand 4
A
1549 1557anti-parallel
Strand 5
A
1601 1613parallel
Strand 6
A
1617 1623anti-parallel
Strand 7
A
1629 1637anti-parallel
Strand 8
A
1641 1646anti-parallel
Strand 9
A
1653 1657anti-parallel
Strand 10
A
1688 1690parallel
Strand 11
A
1714 1716parallel
Strand 12
A
1757 1765parallel
Strand 13
A
1745 1754anti-parallel
Strand 14
A
1737 1742anti-parallel
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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1671 1674first strand
Strand 2
A
1698 1702parallel
Strand 3
A
1726 1730parallel
Strand 4
A
1778 1781parallel
Strand 5
A
1788 1789anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1813 1816first strand
Strand 2
A
1819 1822anti-parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1832 1836first strand
Strand 2
A
1839 1843anti-parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1853 1857first strand
Strand 2
A
1860 1864anti-parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1874 1878first strand
Strand 2
A
1881 1885anti-parallel
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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1894 1898first strand
Strand 2
A
1901 1906anti-parallel
Strand 3
A
1918 1919anti-parallel
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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1925 1929first strand
Strand 2
A
1932 1936anti-parallel
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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1945 1949first strand
Strand 2
A
1952 1956anti-parallel
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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1966 1970first strand
Strand 2
A
1973 1977anti-parallel
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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1987 1991first strand
Strand 2
A
1994 1998anti-parallel
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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2008 2012first strand
Strand 2
A
2015 2019anti-parallel
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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2028 2032first strand
Strand 2
A
2035 2040anti-parallel
Strand 3
A
2052 2053anti-parallel
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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2059 2062first strand
Strand 2
A
2067 2070anti-parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2079 2083first strand
Strand 2
A
2086 2090anti-parallel
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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2100 2104first strand
Strand 2
A
2107 2111anti-parallel
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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2121 2125first strand
Strand 2
A
2128 2132anti-parallel
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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2142 2146first strand
Strand 2
A
2149 2153anti-parallel
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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2162 2166first strand
Strand 2
A
2169 2174anti-parallel
Strand 3
A
2186 2187anti-parallel
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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2193 2197first strand
Strand 2
A
2200 2204anti-parallel
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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2213 2217first strand
Strand 2
A
2220 2224anti-parallel
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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2235 2238first strand
Strand 2
A
2241 2244anti-parallel
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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2254 2258first strand
Strand 2
A
2261 2265anti-parallel
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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2276 2280first strand
Strand 2
A
2283 2287anti-parallel
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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2308 2311first strand
Strand 2
A
2314 2317anti-parallel
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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2327 2331first strand
Strand 2
A
2334 2338anti-parallel
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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2348 2352first strand
Strand 2
A
2355 2359anti-parallel
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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2369 2373first strand
Strand 2
A
2376 2380anti-parallel
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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2390 2394first strand
Strand 2
A
2397 2401anti-parallel
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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2411 2415first strand
Strand 2
A
2418 2422anti-parallel
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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2431 2435first strand
Strand 2
A
2438 2442anti-parallel
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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2462 2466first strand
Strand 2
A
2469 2473anti-parallel
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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2484 2486first strand
Strand 2
A
2489 2491anti-parallel
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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2502 2507first strand
Strand 2
A
2510 2515anti-parallel
Strand 3
A
2518 2519anti-parallel
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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2522 2523first strand
Strand 2
A
2532 2533anti-parallel
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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2553 2557first strand
Strand 2
A
2560 2564anti-parallel
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There are 2 strands in AF6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2573 2577first strand
Strand 2
A
2580 2584anti-parallel
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There are 3 strands in AF7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2595 2597first strand
Strand 2
A
2604 2606anti-parallel
Strand 3
A
2612 2613anti-parallel
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There are 3 strands in AF8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
149 152first strand
Strand 2
B
157 162anti-parallel
Strand 3
B
167 170anti-parallel
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There are 2 strands in AF9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
196 201first strand
Strand 2
B
235 240anti-parallel
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There are 7 strands in AG1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
279 282first strand
Strand 2
B
271 274anti-parallel
Strand 3
B
309 312anti-parallel
Strand 4
B
326 333anti-parallel
Strand 5
B
347 351anti-parallel
Strand 6
B
290 293anti-parallel
Strand 7
B
284 287anti-parallel
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There are 7 strands in AG2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
379 383first strand
Strand 2
B
398 405anti-parallel
Strand 3
B
424 428anti-parallel
Strand 4
B
473 476anti-parallel
Strand 5
B
452 461anti-parallel
Strand 6
B
444 449anti-parallel
Strand 7
B
379 383anti-parallel
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