Analysis of interatomic Contacts of Structural Units in PDB entry:
8JKP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8JKP entry

There is 1 chain in PDB entry 8JKP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2LEU 194
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8JKP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 6Right-handed 310
Helix 2
AA2
A
10 22Right-handed alpha
Helix 3
AA3
A
23 45Right-handed alpha
Helix 4
AA4
A
47 58Right-handed alpha
Helix 5
AA5
A
65 76Right-handed alpha
Helix 6
AA6
A
79 85Right-handed 310
Helix 7
AA7
A
86 94Right-handed alpha
Helix 8
AA8
A
94 104Right-handed alpha
Helix 9
AA9
A
107 116Right-handed alpha
Helix 10
AB1
A
125 138Right-handed alpha
Helix 11
AB2
A
145 156Right-handed alpha
Helix 12
AB3
A
156 176Right-handed alpha
Helix 13
AB4
A
180 191Right-handed alpha
Helix 14
AB5
A
192 194Right-handed 310
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There are no sheets in PDB entry 8JKP
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