Analysis of interatomic Contacts of Structural Units in PDB entry:
8JNG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8JNG entry

There is 1 chain in PDB entry 8JNG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 51PHE 197
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 8JNG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
140 146Right-handed alpha
Helix 2
AA2
A
172 178Right-handed alpha
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There are 3 sheets in PDB entry 8JNG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 60first strand
Strand 2
A
164 170anti-parallel
Strand 3
A
158 161anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 74first strand
Strand 2
A
77 83anti-parallel
Strand 3
A
89 93anti-parallel
Strand 4
A
155 156anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 109first strand
Strand 2
A
112 114anti-parallel
Strand 3
A
121 123anti-parallel
Strand 4
A
129 130anti-parallel
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