Analysis of interatomic Contacts of Structural Units in PDB entry:
8JST


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8JST entry

There is 1 chain in PDB entry 8JST (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1GLY 192
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 8JST. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
154 164Right-handed alpha
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There are 2 sheets in PDB entry 8JST. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 5first strand
Strand 2
A
26 31anti-parallel
Strand 3
A
36 42anti-parallel
Strand 4
A
184 191anti-parallel
Strand 5
A
60 70anti-parallel
Strand 6
A
150 153anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 13first strand
Strand 2
A
16 22anti-parallel
Strand 3
A
46 53anti-parallel
Strand 4
A
170 181anti-parallel
Strand 5
A
73 82anti-parallel
Strand 6
A
86 94anti-parallel
Strand 7
A
131 143parallel
Strand 8
A
114 128anti-parallel
Strand 9
A
105 111anti-parallel
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