Analysis of interatomic Contacts of Structural Units in PDB entry:
8JTO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8JTO entry

There is 1 chain in PDB entry 8JTO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2HIS 360
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 8JTO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
100 106Right-handed alpha
Helix 2
AA2
A
107 110Right-handed 310
Helix 3
AA3
A
117 121Right-handed 310
Helix 4
AA4
A
122 126Right-handed 310
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There is 1 sheet (AA1) in PDB entry 8JTO.

There are 18 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 34first strand
Strand 2
A
3 21anti-parallel
Strand 3
A
342 356anti-parallel
Strand 4
A
309 320anti-parallel
Strand 5
A
290 304anti-parallel
Strand 6
A
274 287anti-parallel
Strand 7
A
257 271anti-parallel
Strand 8
A
236 248anti-parallel
Strand 9
A
221 233anti-parallel
Strand 10
A
182 192anti-parallel
Strand 11
A
169 179anti-parallel
Strand 12
A
151 158anti-parallel
Strand 13
A
137 144anti-parallel
Strand 14
A
91 98anti-parallel
Strand 15
A
81 88anti-parallel
Strand 16
A
55 64anti-parallel
Strand 17
A
40 49anti-parallel
Strand 18
A
3 21anti-parallel
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