Analysis of interatomic Contacts of Structural Units in PDB entry:
8JTV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8JTV entry

There is 1 chain in PDB entry 8JTV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 20LYS 517
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 8JTV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 32Right-handed alpha
Helix 2
AA2
A
33 35Right-handed 310
Helix 3
AA3
A
36 43Right-handed alpha
Helix 4
AA4
A
52 62Right-handed alpha
Helix 5
AA5
A
65 74Right-handed alpha
Helix 6
AA6
A
78 82Right-handed 310
Helix 7
AA7
A
104 109Right-handed 310
Helix 8
AA8
A
133 139Right-handed alpha
Helix 9
AA9
A
144 173Right-handed alpha
Helix 10
AB1
A
176 194Right-handed alpha
Helix 11
AB2
A
198 228Right-handed alpha
Helix 12
AB3
A
234 258Right-handed alpha
Helix 13
AB4
A
260 273Right-handed alpha
Helix 14
AB5
A
340 372Right-handed alpha
Helix 15
AB6
A
374 385Right-handed alpha
Helix 16
AB7
A
385 397Right-handed alpha
Helix 17
AB8
A
403 423Right-handed alpha
Helix 18
AB9
A
427 457Right-handed alpha
Helix 19
AC1
A
461 488Right-handed alpha
Helix 20
AC2
A
492 510Right-handed alpha
Helix 21
AC3
A
511 513Right-handed 310
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There is 1 sheet (AA1) in PDB entry 8JTV.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 50first strand
Strand 2
A
125 127anti-parallel
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