Analysis of interatomic Contacts of Structural Units in PDB entry:
8JUU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8JUU entry

There are 16 chains in PDB entry 8JUU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 27GLY 4415
B
 GLU 27GLY 4415
C
 UNK 1UNK 6
D
 UNK 1UNK 3
G
 UNK 1UNK 5
H
 UNK 0UNK 4
I
 UNK 1UNK 6
J
 UNK 1UNK 3
K
 UNK 1UNK 5
L
 UNK 0UNK 4
M
 UNK 1UNK 6
N
 UNK 1UNK 5
O
 UNK 1UNK 5
P
 UNK 1UNK 6
Q
 UNK 1UNK 5
R
 UNK 1UNK 5
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are152 helices in PDB entry 8JUU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 46Right-handed 310
Helix 2
AA2
A
97 102Right-handed alpha
Helix 3
AA3
A
211 215Right-handed 310
Helix 4
AA4
A
238 240Right-handed 310
Helix 5
AA5
A
310 315Right-handed alpha
Helix 6
AA6
A
349 353Right-handed 310
Helix 7
AA7
A
660 664Right-handed 310
Helix 8
AA8
A
665 669Right-handed 310
Helix 9
AA9
A
749 751Right-handed 310
Helix 10
AB1
A
971 975Right-handed 310
Helix 11
AB2
A
979 983Right-handed 310
Helix 12
AB3
A
1041 1043Right-handed 310
Helix 13
AB4
A
1081 1085Right-handed 310
Helix 14
AB5
A
1095 1099Right-handed 310
Helix 15
AB6
A
1126 1128Right-handed 310
Helix 16
AB7
A
1138 1142Right-handed 310
Helix 17
AB8
A
1164 1168Right-handed 310
Helix 18
AB9
A
1205 1207Right-handed 310
Helix 19
AC1
A
1248 1250Right-handed 310
Helix 20
AC2
A
1260 1264Right-handed 310
Helix 21
AC3
A
1299 1303Right-handed 310
Helix 22
AC4
A
1330 1332Right-handed 310
Helix 23
AC5
A
1355 1361Right-handed 310
Helix 24
AC6
A
1694 1698Right-handed 310
Helix 25
AC7
A
1788 1790Right-handed 310
Helix 26
AC8
A
2021 2026Right-handed alpha
Helix 27
AC9
A
2350 2354Right-handed 310
Helix 28
AD1
A
2654 2663Right-handed 310
Helix 29
AD2
A
2717 2719Right-handed 310
Helix 30
AD3
A
2733 2738Right-handed alpha
Helix 31
AD4
A
2758 2760Right-handed 310
Helix 32
AD5
A
2798 2800Right-handed 310
Helix 33
AD6
A
2838 2842Right-handed 310
Helix 34
AD7
A
2856 2861Right-handed 310
Helix 35
AD8
A
2924 2926Right-handed 310
Helix 36
AD9
A
2940 2944Right-handed 310
Helix 37
AE1
A
2962 2966Right-handed 310
Helix 38
AE2
A
2984 2989Right-handed alpha
Helix 39
AE3
A
3009 3013Right-handed 310
Helix 40
AE4
A
3091 3095Right-handed 310
Helix 41
AE5
A
3156 3161Right-handed alpha
Helix 42
AE6
A
3162 3165Right-handed 310
Helix 43
AE7
A
3332 3334Right-handed 310
Helix 44
AE8
A
3460 3464Right-handed 310
Helix 45
AE9
A
3474 3478Right-handed 310
Helix 46
AF1
A
3531 3533Right-handed 310
Helix 47
AF2
A
3569 3573Right-handed 310
Helix 48
AF3
A
3583 3586Right-handed 310
Helix 49
AF4
A
3587 3592Right-handed alpha
Helix 50
AF5
A
3612 3614Right-handed 310
Helix 51
AF6
A
3628 3635Right-handed alpha
Helix 52
AF7
A
3653 3655Right-handed 310
Helix 53
AF8
A
3669 3674Right-handed alpha
Helix 54
AF9
A
3675 3679Right-handed 310
Helix 55
AG1
A
3698 3700Right-handed 310
Helix 56
AG2
A
3710 3714Right-handed 310
Helix 57
AG3
A
3738 3740Right-handed 310
Helix 58
AG4
A
3777 3779Right-handed 310
Helix 59
AG5
A
3816 3818Right-handed 310
Helix 60
AG6
A
3858 3862Right-handed 310
Helix 61
AG7
A
3872 3876Right-handed 310
Helix 62
AG8
A
3879 3883Right-handed 310
Helix 63
AG9
A
3902 3904Right-handed 310
Helix 64
AH1
A
3914 3917Right-handed 310
Helix 65
AH2
A
3918 3923Right-handed alpha
Helix 66
AH3
A
3946 3948Right-handed 310
Helix 67
AH4
A
3958 3962Right-handed 310
Helix 68
AH5
A
3971 3975Right-handed 310
Helix 69
AH6
A
4011 4015Right-handed 310
Helix 70
AH7
B
44 46Right-handed 310
Helix 71
AH8
B
56 60Right-handed 310
Helix 72
AH9
B
97 102Right-handed alpha
Helix 73
AI1
B
197 201Right-handed 310
Helix 74
AI2
B
211 215Right-handed 310
Helix 75
AI3
B
238 240Right-handed 310
Helix 76
AI4
B
247 251Right-handed 310
Helix 77
AI5
B
282 284Right-handed 310
Helix 78
AI6
B
310 315Right-handed alpha
Helix 79
AI7
B
349 353Right-handed 310
Helix 80
AI8
B
651 655Right-handed 310
Helix 81
AI9
B
664 669Right-handed 310
Helix 82
AJ1
B
679 684Right-handed alpha
Helix 83
AJ2
B
749 751Right-handed 310
Helix 84
AJ3
B
979 983Right-handed 310
Helix 85
AJ4
B
1039 1043Right-handed 310
Helix 86
AJ5
B
1053 1057Right-handed 310
Helix 87
AJ6
B
1083 1085Right-handed 310
Helix 88
AJ7
B
1095 1099Right-handed 310
Helix 89
AJ8
B
1126 1128Right-handed 310
Helix 90
AJ9
B
1164 1168Right-handed 310
Helix 91
AK1
B
1205 1207Right-handed 310
Helix 92
AK2
B
1217 1221Right-handed 310
Helix 93
AK3
B
1248 1250Right-handed 310
Helix 94
AK4
B
1260 1264Right-handed 310
Helix 95
AK5
B
1288 1290Right-handed 310
Helix 96
AK6
B
1300 1305Right-handed alpha
Helix 97
AK7
B
1357 1361Right-handed 310
Helix 98
AK8
B
1393 1397Right-handed 310
Helix 99
AK9
B
1694 1698Right-handed 310
Helix 100
AL1
B
1703 1708Right-handed 310
Helix 101
AL2
B
1881 1883Right-handed 310
Helix 102
AL3
B
2016 2020Right-handed 310
Helix 103
AL4
B
2021 2026Right-handed alpha
Helix 104
AL5
B
2331 2335Right-handed 310
Helix 105
AL6
B
2349 2354Right-handed 310
Helix 106
AL7
B
2517 2519Right-handed 310
Helix 107
AL8
B
2657 2663Right-handed 310
Helix 108
AL9
B
2687 2691Right-handed alpha
Helix 109
AM1
B
2717 2719Right-handed 310
Helix 110
AM2
B
2729 2733Right-handed 310
Helix 111
AM3
B
2735 2740Right-handed alpha
Helix 112
AM4
B
2758 2760Right-handed 310
Helix 113
AM5
B
2798 2800Right-handed 310
Helix 114
AM6
B
2838 2842Right-handed 310
Helix 115
AM7
B
2852 2856Right-handed 310
Helix 116
AM8
B
2904 2908Right-handed 310
Helix 117
AM9
B
2924 2926Right-handed 310
Helix 118
AN1
B
2983 2987Right-handed 310
Helix 119
AN2
B
3009 3013Right-handed 310
Helix 120
AN3
B
3048 3052Right-handed 310
Helix 121
AN4
B
3062 3065Right-handed 310
Helix 122
AN5
B
3066 3071Right-handed alpha
Helix 123
AN6
B
3093 3095Right-handed 310
Helix 124
AN7
B
3156 3161Right-handed alpha
Helix 125
AN8
B
3162 3165Right-handed 310
Helix 126
AN9
B
3460 3464Right-handed 310
Helix 127
AO1
B
3474 3478Right-handed 310
Helix 128
AO2
B
3531 3533Right-handed 310
Helix 129
AO3
B
3569 3573Right-handed 310
Helix 130
AO4
B
3583 3586Right-handed 310
Helix 131
AO5
B
3587 3592Right-handed alpha
Helix 132
AO6
B
3612 3614Right-handed 310
Helix 133
AO7
B
3628 3635Right-handed alpha
Helix 134
AO8
B
3653 3655Right-handed 310
Helix 135
AO9
B
3664 3668Right-handed 310
Helix 136
AP1
B
3669 3674Right-handed alpha
Helix 137
AP2
B
3675 3679Right-handed 310
Helix 138
AP3
B
3698 3700Right-handed 310
Helix 139
AP4
B
3715 3719Right-handed 310
Helix 140
AP5
B
3738 3740Right-handed 310
Helix 141
AP6
B
3750 3754Right-handed 310
Helix 142
AP7
B
3777 3779Right-handed 310
Helix 143
AP8
B
3789 3793Right-handed 310
Helix 144
AP9
B
3816 3818Right-handed 310
Helix 145
AQ1
B
3828 3833Right-handed alpha
Helix 146
AQ2
B
3860 3862Right-handed 310
Helix 147
AQ3
B
3876 3881Right-handed alpha
Helix 148
AQ4
B
3902 3904Right-handed 310
Helix 149
AQ5
B
3946 3948Right-handed 310
Helix 150
AQ6
B
3958 3962Right-handed 310
Helix 151
AQ7
B
3971 3975Right-handed 310
Helix 152
AQ8
B
4011 4015Right-handed 310
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