Analysis of interatomic Contacts of Structural Units in PDB entry:
8JWG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8JWG entry

There is 1 chain in PDB entry 8JWG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 27ALA 1418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 8JWG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 39Right-handed alpha
Helix 2
AA2
A
52 63Right-handed alpha
Helix 3
AA3
A
64 69Right-handed 310
Helix 4
AA4
A
70 86Right-handed alpha
Helix 5
AA5
A
91 136Right-handed alpha
Helix 6
AA6
A
140 146Right-handed alpha
Helix 7
AA7
A
148 163Right-handed alpha
Helix 8
AA8
A
167 191Right-handed alpha
Helix 9
AA9
A
192 199Right-handed alpha
Helix 10
AB1
A
202 240Right-handed alpha
Helix 11
AB2
A
241 248Right-handed alpha
Helix 12
AB3
A
250 305Right-handed alpha
Helix 13
AB4
A
315 318Right-handed 310
Helix 14
AB5
A
319 330Right-handed alpha
Helix 15
AB6
A
331 335Right-handed 310
Helix 16
AB7
A
336 358Right-handed alpha
Helix 17
AB8
A
418 428Right-handed alpha
Helix 18
AB9
A
444 448Right-handed 310
Helix 19
AC1
A
449 456Right-handed alpha
Helix 20
AC2
A
472 477Right-handed alpha
Helix 21
AC3
A
479 489Right-handed alpha
Helix 22
AC4
A
519 523Right-handed alpha
Helix 23
AC5
A
529 539Right-handed alpha
Helix 24
AC6
A
541 546Right-handed alpha
Helix 25
AC7
A
564 579Right-handed alpha
Helix 26
AC8
A
594 607Right-handed alpha
Helix 27
AC9
A
622 626Right-handed 310
Helix 28
AD1
A
676 681Right-handed alpha
Helix 29
AD2
A
685 694Right-handed alpha
Helix 30
AD3
A
772 783Right-handed alpha
Helix 31
AD4
A
785 803Right-handed alpha
Helix 32
AD5
A
804 816Right-handed alpha
Helix 33
AD6
A
822 849Right-handed alpha
Helix 34
AD7
A
850 873Right-handed alpha
Helix 35
AD8
A
875 881Right-handed alpha
Helix 36
AD9
A
885 905Right-handed alpha
Helix 37
AE1
A
908 927Right-handed alpha
Helix 38
AE2
A
929 945Right-handed alpha
Helix 39
AE3
A
948 962Right-handed alpha
Helix 40
AE4
A
984 992Right-handed alpha
Helix 41
AE5
A
1008 1035Right-handed alpha
Helix 42
AE6
A
1037 1055Right-handed alpha
Helix 43
AE7
A
1059 1081Right-handed alpha
Helix 44
AE8
A
1087 1098Right-handed alpha
Helix 45
AE9
A
1099 1102Right-handed 310
Helix 46
AF1
A
1169 1175Right-handed alpha
Helix 47
AF2
A
1243 1248Right-handed alpha
Helix 48
AF3
A
1264 1270Right-handed alpha
Helix 49
AF4
A
1277 1288Right-handed alpha
Helix 50
AF5
A
1293 1297Right-handed 310
Helix 51
AF6
A
1306 1310Right-handed 310
Helix 52
AF7
A
1313 1328Right-handed alpha
Helix 53
AF8
A
1343 1360Right-handed alpha
Helix 54
AF9
A
1371 1376Right-handed alpha
Helix 55
AG1
A
1410 1417Right-handed alpha
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There are 4 sheets in PDB entry 8JWG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
407 408first strand
Strand 2
A
615 616parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
457 458first strand
Strand 2
A
583 584parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1150 1151first strand
Strand 2
A
1126 1131anti-parallel
Strand 3
A
1230 1234anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1332 1334first strand
Strand 2
A
1364 1367parallel
Strand 3
A
1157 1161parallel
Strand 4
A
1380 1385parallel
Strand 5
A
1393 1394anti-parallel
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