Analysis of interatomic Contacts of Structural Units in PDB entry:
8JWH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8JWH entry

There is 1 chain in PDB entry 8JWH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1ASP 597
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 8JWH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 35Right-handed alpha
Helix 2
AA2
A
37 64Right-handed alpha
Helix 3
AA3
A
66 70Right-handed 310
Helix 4
AA4
A
72 83Right-handed alpha
Helix 5
AA5
A
86 90Right-handed 310
Helix 6
AA6
A
91 112Right-handed alpha
Helix 7
AA7
A
129 137Right-handed alpha
Helix 8
AA8
A
139 176Right-handed alpha
Helix 9
AA9
A
180 188Right-handed alpha
Helix 10
AB1
A
201 234Right-handed alpha
Helix 11
AB2
A
260 265Right-handed alpha
Helix 12
AB3
A
276 282Right-handed alpha
Helix 13
AB4
A
285 300Right-handed alpha
Helix 14
AB5
A
306 313Right-handed alpha
Helix 15
AB6
A
347 367Right-handed alpha
Helix 16
AB7
A
368 370Right-handed 310
Helix 17
AB8
A
371 375Right-handed 310
Helix 18
AB9
A
379 395Right-handed alpha
Helix 19
AC1
A
396 403Right-handed alpha
Helix 20
AC2
A
413 448Right-handed alpha
Helix 21
AC3
A
453 466Right-handed alpha
Helix 22
AC4
A
481 484Right-handed 310
Helix 23
AC5
A
485 490Right-handed alpha
Helix 24
AC6
A
494 515Right-handed alpha
Helix 25
AC7
A
520 524Right-handed 310
Helix 26
AC8
A
529 543Right-handed alpha
Helix 27
AC9
A
547 556Right-handed alpha
Helix 28
AD1
A
563 570Right-handed alpha
Helix 29
AD2
A
570 581Right-handed alpha
Helix 30
AD3
A
582 584Right-handed 310
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There are 3 sheets in PDB entry 8JWH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 116first strand
Strand 2
A
122 124anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 245first strand
Strand 2
A
469 470parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 332first strand
Strand 2
A
338 341anti-parallel
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