Analysis of interatomic Contacts of Structural Units in PDB entry:
8JY8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8JY8 entry

There are 4 chains in PDB entry 8JY8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 71HIS 312
B
 TYR 71HIS 312
C
 TYR 71HIS 312
D
 TYR 71HIS 312
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 8JY8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
71 98Right-handed alpha
Helix 2
AA2
A
103 122Right-handed alpha
Helix 3
AA3
A
130 140Right-handed alpha
Helix 4
AA4
A
147 170Right-handed alpha
Helix 5
AA5
A
172 177Right-handed alpha
Helix 6
AA6
A
190 195Right-handed alpha
Helix 7
AA7
A
204 226Right-handed alpha
Helix 8
AA8
A
236 253Right-handed alpha
Helix 9
AA9
A
261 276Right-handed alpha
Helix 10
AB1
A
282 287Right-handed alpha
Helix 11
AB2
A
288 310Right-handed alpha
Helix 12
AB3
B
72 98Right-handed alpha
Helix 13
AB4
B
103 122Right-handed alpha
Helix 14
AB5
B
130 140Right-handed alpha
Helix 15
AB6
B
147 170Right-handed alpha
Helix 16
AB7
B
172 177Right-handed alpha
Helix 17
AB8
B
190 195Right-handed alpha
Helix 18
AB9
B
204 226Right-handed alpha
Helix 19
AC1
B
236 253Right-handed alpha
Helix 20
AC2
B
261 276Right-handed alpha
Helix 21
AC3
B
282 287Right-handed alpha
Helix 22
AC4
B
288 310Right-handed alpha
Helix 23
AC5
C
72 98Right-handed alpha
Helix 24
AC6
C
103 122Right-handed alpha
Helix 25
AC7
C
130 140Right-handed alpha
Helix 26
AC8
C
147 170Right-handed alpha
Helix 27
AC9
C
172 177Right-handed alpha
Helix 28
AD1
C
190 195Right-handed alpha
Helix 29
AD2
C
204 226Right-handed alpha
Helix 30
AD3
C
236 253Right-handed alpha
Helix 31
AD4
C
261 276Right-handed alpha
Helix 32
AD5
C
282 287Right-handed alpha
Helix 33
AD6
C
288 310Right-handed alpha
Helix 34
AD7
D
72 98Right-handed alpha
Helix 35
AD8
D
103 122Right-handed alpha
Helix 36
AD9
D
130 140Right-handed alpha
Helix 37
AE1
D
147 170Right-handed alpha
Helix 38
AE2
D
172 177Right-handed alpha
Helix 39
AE3
D
190 195Right-handed alpha
Helix 40
AE4
D
204 226Right-handed alpha
Helix 41
AE5
D
236 253Right-handed alpha
Helix 42
AE6
D
261 276Right-handed alpha
Helix 43
AE7
D
282 287Right-handed alpha
Helix 44
AE8
D
288 310Right-handed alpha
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There are no sheets in PDB entry 8JY8
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