Analysis of interatomic Contacts of Structural Units in PDB entry:
8JZN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8JZN entry

There is 1 chain in PDB entry 8JZN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 141HIS 1861
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 78 helices in PDB entry 8JZN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
148 153Right-handed alpha
Helix 2
AA2
A
160 176Right-handed alpha
Helix 3
AA3
A
178 197Right-handed alpha
Helix 4
AA4
A
201 214Right-handed alpha
Helix 5
AA5
A
219 229Right-handed alpha
Helix 6
AA6
A
232 245Right-handed alpha
Helix 7
AA7
A
281 295Right-handed alpha
Helix 8
AA8
A
297 313Right-handed alpha
Helix 9
AA9
A
321 337Right-handed alpha
Helix 10
AB1
A
338 343Right-handed alpha
Helix 11
AB2
A
351 357Right-handed alpha
Helix 12
AB3
A
357 369Right-handed alpha
Helix 13
AB4
A
389 395Right-handed alpha
Helix 14
AB5
A
396 398Right-handed 310
Helix 15
AB6
A
399 404Right-handed alpha
Helix 16
AB7
A
413 417Right-handed 310
Helix 17
AB8
A
418 426Right-handed 310
Helix 18
AB9
A
430 434Right-handed 310
Helix 19
AC1
A
443 452Right-handed alpha
Helix 20
AC2
A
452 470Right-handed alpha
Helix 21
AC3
A
471 475Right-handed 310
Helix 22
AC4
A
488 497Right-handed alpha
Helix 23
AC5
A
497 515Right-handed alpha
Helix 24
AC6
A
526 552Right-handed alpha
Helix 25
AC7
A
559 583Right-handed alpha
Helix 26
AC8
A
603 608Right-handed alpha
Helix 27
AC9
A
615 639Right-handed alpha
Helix 28
AD1
A
641 643Right-handed 310
Helix 29
AD2
A
644 652Right-handed alpha
Helix 30
AD3
A
671 711Right-handed alpha
Helix 31
AD4
A
718 725Right-handed alpha
Helix 32
AD5
A
725 734Right-handed alpha
Helix 33
AD6
A
745 764Right-handed alpha
Helix 34
AD7
A
768 774Right-handed alpha
Helix 35
AD8
A
794 799Right-handed alpha
Helix 36
AD9
A
813 826Right-handed alpha
Helix 37
AE1
A
835 839Right-handed 310
Helix 38
AE2
A
856 862Right-handed alpha
Helix 39
AE3
A
871 880Right-handed alpha
Helix 40
AE4
A
880 899Right-handed alpha
Helix 41
AE5
A
933 945Right-handed alpha
Helix 42
AE6
A
949 958Right-handed alpha
Helix 43
AE7
A
958 971Right-handed alpha
Helix 44
AE8
A
972 980Right-handed alpha
Helix 45
AE9
A
982 997Right-handed alpha
Helix 46
AF1
A
1006 1010Right-handed 310
Helix 47
AF2
A
1011 1025Right-handed alpha
Helix 48
AF3
A
1081 1089Right-handed alpha
Helix 49
AF4
A
1090 1093Right-handed 310
Helix 50
AF5
A
1108 1113Right-handed alpha
Helix 51
AF6
A
1114 1119Right-handed alpha
Helix 52
AF7
A
1120 1123Right-handed 310
Helix 53
AF8
A
1138 1142Right-handed 310
Helix 54
AF9
A
1172 1187Right-handed alpha
Helix 55
AG1
A
1201 1206Right-handed alpha
Helix 56
AG2
A
1227 1232Right-handed alpha
Helix 57
AG3
A
1267 1271Right-handed 310
Helix 58
AG4
A
1272 1280Right-handed alpha
Helix 59
AG5
A
1283 1294Right-handed alpha
Helix 60
AG6
A
1294 1325Right-handed alpha
Helix 61
AG7
A
1348 1353Right-handed alpha
Helix 62
AG8
A
1353 1368Right-handed alpha
Helix 63
AG9
A
1370 1381Right-handed alpha
Helix 64
AH1
A
1384 1397Right-handed alpha
Helix 65
AH2
A
1437 1445Right-handed alpha
Helix 66
AH3
A
1449 1467Right-handed alpha
Helix 67
AH4
A
1471 1485Right-handed alpha
Helix 68
AH5
A
1495 1512Right-handed alpha
Helix 69
AH6
A
1560 1565Right-handed alpha
Helix 70
AH7
A
1565 1583Right-handed alpha
Helix 71
AH8
A
1597 1623Right-handed alpha
Helix 72
AH9
A
1640 1665Right-handed alpha
Helix 73
AI1
A
1668 1694Right-handed alpha
Helix 74
AI2
A
1725 1753Right-handed alpha
Helix 75
AI3
A
1754 1759Right-handed alpha
Helix 76
AI4
A
1763 1774Right-handed alpha
Helix 77
AI5
A
1786 1800Right-handed alpha
Helix 78
AI6
A
1800 1821Right-handed alpha
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There are 3 sheets in PDB entry 8JZN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 373first strand
Strand 2
A
376 379anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
778 781first strand
Strand 2
A
788 791anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1068 1071first strand
Strand 2
A
1046 1053anti-parallel
Strand 3
A
1029 1036anti-parallel
Strand 4
A
998 1004parallel
Strand 5
A
842 848parallel
Strand 6
A
1097 1100parallel
Strand 7
A
1198 1200anti-parallel
Strand 8
A
1148 1158anti-parallel
Strand 9
A
1235 1247parallel
Strand 10
A
1105 1106anti-parallel
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