Analysis of interatomic Contacts of Structural Units in PDB entry:
8JZO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8JZO entry

There are 6 chains in PDB entry 8JZO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1LEU 759
B
MET 1LEU 759
C
MET 1LEU 759
D
MET 1LEU 759
E
MET 1LEU 759
F
MET 1LEU 759
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are216 helices in PDB entry 8JZO. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
2 15Right-handed alpha
Helix 2
AA2
A
31 39Right-handed alpha
Helix 3
AA3
A
43 53Right-handed alpha
Helix 4
AA4
A
56 61Right-handed alpha
Helix 5
AA5
A
62 64Right-handed 310
Helix 6
AA6
A
83 103Right-handed alpha
Helix 7
AA7
A
115 126Right-handed alpha
Helix 8
AA8
A
127 130Right-handed 310
Helix 9
AA9
A
141 154Right-handed alpha
Helix 10
AB1
A
161 182Right-handed alpha
Helix 11
AB2
A
196 210Right-handed alpha
Helix 12
AB3
A
212 214Right-handed 310
Helix 13
AB4
A
234 239Right-handed alpha
Helix 14
AB5
A
249 255Right-handed alpha
Helix 15
AB6
A
270 277Right-handed alpha
Helix 16
AB7
A
294 302Right-handed alpha
Helix 17
AB8
A
319 322Right-handed 310
Helix 18
AB9
A
323 334Right-handed alpha
Helix 19
AC1
A
340 355Right-handed alpha
Helix 20
AC2
A
360 367Right-handed alpha
Helix 21
AC3
A
386 404Right-handed alpha
Helix 22
AC4
A
412 426Right-handed alpha
Helix 23
AC5
A
427 439Right-handed alpha
Helix 24
AC6
A
452 466Right-handed alpha
Helix 25
AC7
A
475 487Right-handed alpha
Helix 26
AC8
A
506 519Right-handed alpha
Helix 27
AC9
A
520 522Right-handed 310
Helix 28
AD1
A
524 535Right-handed alpha
Helix 29
AD2
A
535 546Right-handed alpha
Helix 30
AD3
A
559 572Right-handed alpha
Helix 31
AD4
A
605 623Right-handed alpha
Helix 32
AD5
A
642 659Right-handed alpha
Helix 33
AD6
A
669 675Right-handed alpha
Helix 34
AD7
A
675 683Right-handed alpha
Helix 35
AD8
A
699 714Right-handed alpha
Helix 36
AD9
A
739 756Right-handed alpha
Helix 37
AE1
B
2 15Right-handed alpha
Helix 38
AE2
B
31 39Right-handed alpha
Helix 39
AE3
B
43 53Right-handed alpha
Helix 40
AE4
B
56 61Right-handed alpha
Helix 41
AE5
B
62 64Right-handed 310
Helix 42
AE6
B
83 103Right-handed alpha
Helix 43
AE7
B
115 126Right-handed alpha
Helix 44
AE8
B
127 130Right-handed 310
Helix 45
AE9
B
141 154Right-handed alpha
Helix 46
AF1
B
161 182Right-handed alpha
Helix 47
AF2
B
196 210Right-handed alpha
Helix 48
AF3
B
212 214Right-handed 310
Helix 49
AF4
B
234 239Right-handed alpha
Helix 50
AF5
B
249 255Right-handed alpha
Helix 51
AF6
B
270 277Right-handed alpha
Helix 52
AF7
B
294 302Right-handed alpha
Helix 53
AF8
B
319 322Right-handed 310
Helix 54
AF9
B
323 334Right-handed alpha
Helix 55
AG1
B
340 355Right-handed alpha
Helix 56
AG2
B
360 367Right-handed alpha
Helix 57
AG3
B
386 404Right-handed alpha
Helix 58
AG4
B
412 426Right-handed alpha
Helix 59
AG5
B
427 439Right-handed alpha
Helix 60
AG6
B
452 466Right-handed alpha
Helix 61
AG7
B
475 487Right-handed alpha
Helix 62
AG8
B
506 519Right-handed alpha
Helix 63
AG9
B
520 522Right-handed 310
Helix 64
AH1
B
524 535Right-handed alpha
Helix 65
AH2
B
535 546Right-handed alpha
Helix 66
AH3
B
559 572Right-handed alpha
Helix 67
AH4
B
605 623Right-handed alpha
Helix 68
AH5
B
642 659Right-handed alpha
Helix 69
AH6
B
669 675Right-handed alpha
Helix 70
AH7
B
675 683Right-handed alpha
Helix 71
AH8
B
699 714Right-handed alpha
Helix 72
AH9
B
739 756Right-handed alpha
Helix 73
AI1
C
2 15Right-handed alpha
Helix 74
AI2
C
31 39Right-handed alpha
Helix 75
AI3
C
43 53Right-handed alpha
Helix 76
AI4
C
56 61Right-handed alpha
Helix 77
AI5
C
62 64Right-handed 310
Helix 78
AI6
C
83 103Right-handed alpha
Helix 79
AI7
C
115 126Right-handed alpha
Helix 80
AI8
C
127 130Right-handed 310
Helix 81
AI9
C
141 154Right-handed alpha
Helix 82
AJ1
C
161 182Right-handed alpha
Helix 83
AJ2
C
196 210Right-handed alpha
Helix 84
AJ3
C
212 214Right-handed 310
Helix 85
AJ4
C
234 239Right-handed alpha
Helix 86
AJ5
C
249 255Right-handed alpha
Helix 87
AJ6
C
270 277Right-handed alpha
Helix 88
AJ7
C
294 302Right-handed alpha
Helix 89
AJ8
C
319 322Right-handed 310
Helix 90
AJ9
C
323 334Right-handed alpha
Helix 91
AK1
C
340 355Right-handed alpha
Helix 92
AK2
C
360 367Right-handed alpha
Helix 93
AK3
C
386 404Right-handed alpha
Helix 94
AK4
C
412 426Right-handed alpha
Helix 95
AK5
C
427 439Right-handed alpha
Helix 96
AK6
C
452 466Right-handed alpha
Helix 97
AK7
C
475 487Right-handed alpha
Helix 98
AK8
C
506 519Right-handed alpha
Helix 99
AK9
C
520 522Right-handed 310
Helix 100
AL1
C
524 535Right-handed alpha
Helix 101
AL2
C
535 546Right-handed alpha
Helix 102
AL3
C
559 572Right-handed alpha
Helix 103
AL4
C
605 623Right-handed alpha
Helix 104
AL5
C
642 659Right-handed alpha
Helix 105
AL6
C
669 675Right-handed alpha
Helix 106
AL7
C
675 683Right-handed alpha
Helix 107
AL8
C
699 714Right-handed alpha
Helix 108
AL9
C
739 756Right-handed alpha
Helix 109
AM1
D
2 15Right-handed alpha
Helix 110
AM2
D
31 39Right-handed alpha
Helix 111
AM3
D
43 53Right-handed alpha
Helix 112
AM4
D
56 61Right-handed alpha
Helix 113
AM5
D
62 64Right-handed 310
Helix 114
AM6
D
83 103Right-handed alpha
Helix 115
AM7
D
115 126Right-handed alpha
Helix 116
AM8
D
127 130Right-handed 310
Helix 117
AM9
D
141 154Right-handed alpha
Helix 118
AN1
D
161 182Right-handed alpha
Helix 119
AN2
D
196 210Right-handed alpha
Helix 120
AN3
D
212 214Right-handed 310
Helix 121
AN4
D
234 239Right-handed alpha
Helix 122
AN5
D
249 255Right-handed alpha
Helix 123
AN6
D
270 277Right-handed alpha
Helix 124
AN7
D
294 302Right-handed alpha
Helix 125
AN8
D
319 322Right-handed 310
Helix 126
AN9
D
323 334Right-handed alpha
Helix 127
AO1
D
340 355Right-handed alpha
Helix 128
AO2
D
360 367Right-handed alpha
Helix 129
AO3
D
386 404Right-handed alpha
Helix 130
AO4
D
412 426Right-handed alpha
Helix 131
AO5
D
427 439Right-handed alpha
Helix 132
AO6
D
452 466Right-handed alpha
Helix 133
AO7
D
475 487Right-handed alpha
Helix 134
AO8
D
506 519Right-handed alpha
Helix 135
AO9
D
520 522Right-handed 310
Helix 136
AP1
D
524 535Right-handed alpha
Helix 137
AP2
D
535 546Right-handed alpha
Helix 138
AP3
D
559 572Right-handed alpha
Helix 139
AP4
D
605 623Right-handed alpha
Helix 140
AP5
D
642 659Right-handed alpha
Helix 141
AP6
D
669 675Right-handed alpha
Helix 142
AP7
D
675 683Right-handed alpha
Helix 143
AP8
D
699 714Right-handed alpha
Helix 144
AP9
D
739 756Right-handed alpha
Helix 145
AQ1
E
2 15Right-handed alpha
Helix 146
AQ2
E
31 39Right-handed alpha
Helix 147
AQ3
E
43 53Right-handed alpha
Helix 148
AQ4
E
56 61Right-handed alpha
Helix 149
AQ5
E
62 64Right-handed 310
Helix 150
AQ6
E
83 103Right-handed alpha
Helix 151
AQ7
E
115 126Right-handed alpha
Helix 152
AQ8
E
127 130Right-handed 310
Helix 153
AQ9
E
141 154Right-handed alpha
Helix 154
AR1
E
161 182Right-handed alpha
Helix 155
AR2
E
196 210Right-handed alpha
Helix 156
AR3
E
212 214Right-handed 310
Helix 157
AR4
E
234 239Right-handed alpha
Helix 158
AR5
E
249 255Right-handed alpha
Helix 159
AR6
E
270 277Right-handed alpha
Helix 160
AR7
E
294 302Right-handed alpha
Helix 161
AR8
E
319 322Right-handed 310
Helix 162
AR9
E
323 334Right-handed alpha
Helix 163
AS1
E
340 355Right-handed alpha
Helix 164
AS2
E
360 367Right-handed alpha
Helix 165
AS3
E
386 404Right-handed alpha
Helix 166
AS4
E
412 426Right-handed alpha
Helix 167
AS5
E
427 439Right-handed alpha
Helix 168
AS6
E
452 466Right-handed alpha
Helix 169
AS7
E
475 487Right-handed alpha
Helix 170
AS8
E
506 519Right-handed alpha
Helix 171
AS9
E
520 522Right-handed 310
Helix 172
AT1
E
524 535Right-handed alpha
Helix 173
AT2
E
535 546Right-handed alpha
Helix 174
AT3
E
559 572Right-handed alpha
Helix 175
AT4
E
605 623Right-handed alpha
Helix 176
AT5
E
642 659Right-handed alpha
Helix 177
AT6
E
669 675Right-handed alpha
Helix 178
AT7
E
675 683Right-handed alpha
Helix 179
AT8
E
699 714Right-handed alpha
Helix 180
AT9
E
739 756Right-handed alpha
Helix 181
AU1
F
2 15Right-handed alpha
Helix 182
AU2
F
31 39Right-handed alpha
Helix 183
AU3
F
43 53Right-handed alpha
Helix 184
AU4
F
56 61Right-handed alpha
Helix 185
AU5
F
62 64Right-handed 310
Helix 186
AU6
F
83 103Right-handed alpha
Helix 187
AU7
F
115 126Right-handed alpha
Helix 188
AU8
F
127 130Right-handed 310
Helix 189
AU9
F
141 154Right-handed alpha
Helix 190
AV1
F
161 182Right-handed alpha
Helix 191
AV2
F
196 210Right-handed alpha
Helix 192
AV3
F
212 214Right-handed 310
Helix 193
AV4
F
234 239Right-handed alpha
Helix 194
AV5
F
249 255Right-handed alpha
Helix 195
AV6
F
270 277Right-handed alpha
Helix 196
AV7
F
294 302Right-handed alpha
Helix 197
AV8
F
319 322Right-handed 310
Helix 198
AV9
F
323 334Right-handed alpha
Helix 199
AW1
F
340 355Right-handed alpha
Helix 200
AW2
F
360 367Right-handed alpha
Helix 201
AW3
F
386 404Right-handed alpha
Helix 202
AW4
F
412 426Right-handed alpha
Helix 203
AW5
F
427 439Right-handed alpha
Helix 204
AW6
F
452 466Right-handed alpha
Helix 205
AW7
F
475 487Right-handed alpha
Helix 206
AW8
F
506 519Right-handed alpha
Helix 207
AW9
F
520 522Right-handed 310
Helix 208
AX1
F
524 535Right-handed alpha
Helix 209
AX2
F
535 546Right-handed alpha
Helix 210
AX3
F
559 572Right-handed alpha
Helix 211
AX4
F
605 623Right-handed alpha
Helix 212
AX5
F
642 659Right-handed alpha
Helix 213
AX6
F
669 675Right-handed alpha
Helix 214
AX7
F
675 683Right-handed alpha
Helix 215
AX8
F
699 714Right-handed alpha
Helix 216
AX9
F
739 756Right-handed alpha
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There are 33 sheets in PDB entry 8JZO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
21 25first strand
Strand 2
B
21 25anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
105 110first strand
Strand 2
A
66 71parallel
Strand 3
A
133 135parallel
Strand 4
A
158 160parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
223 224first strand
Strand 2
A
216 220anti-parallel
Strand 3
A
190 193parallel
Strand 4
A
259 262parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
282 284first strand
Strand 2
A
306 308parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
497 499first strand
Strand 2
A
469 473parallel
Strand 3
A
444 447parallel
Strand 4
A
551 554parallel
Strand 5
A
731 733parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
664 668first strand
Strand 2
A
629 632parallel
Strand 3
A
694 696parallel
Strand 4
A
591 596parallel
Strand 5
A
581 588anti-parallel
Strand 6
A
720 725anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
105 110first strand
Strand 2
B
66 71parallel
Strand 3
B
133 135parallel
Strand 4
B
158 160parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
223 224first strand
Strand 2
B
216 220anti-parallel
Strand 3
B
190 193parallel
Strand 4
B
259 262parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
282 284first strand
Strand 2
B
306 308parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
497 499first strand
Strand 2
B
469 473parallel
Strand 3
B
444 447parallel
Strand 4
B
551 554parallel
Strand 5
B
731 733parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
664 668first strand
Strand 2
B
629 632parallel
Strand 3
B
694 696parallel
Strand 4
B
591 596parallel
Strand 5
B
581 588anti-parallel
Strand 6
B
720 725anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
21 25first strand
Strand 2
D
21 25anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
105 110first strand
Strand 2
C
66 71parallel
Strand 3
C
133 135parallel
Strand 4
C
158 160parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
223 224first strand
Strand 2
C
216 220anti-parallel
Strand 3
C
190 193parallel
Strand 4
C
259 262parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
282 284first strand
Strand 2
C
306 308parallel
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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
497 499first strand
Strand 2
C
469 473parallel
Strand 3
C
444 447parallel
Strand 4
C
551 554parallel
Strand 5
C
731 733parallel
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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
664 668first strand
Strand 2
C
629 632parallel
Strand 3
C
694 696parallel
Strand 4
C
591 596parallel
Strand 5
C
581 588anti-parallel
Strand 6
C
720 725anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
105 110first strand
Strand 2
D
66 71parallel
Strand 3
D
133 135parallel
Strand 4
D
158 160parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
223 224first strand
Strand 2
D
216 220anti-parallel
Strand 3
D
190 193parallel
Strand 4
D
259 262parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
282 284first strand
Strand 2
D
306 308parallel
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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
497 499first strand
Strand 2
D
469 473parallel
Strand 3
D
444 447parallel
Strand 4
D
551 554parallel
Strand 5
D
731 733parallel
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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
664 668first strand
Strand 2
D
629 632parallel
Strand 3
D
694 696parallel
Strand 4
D
591 596parallel
Strand 5
D
581 588anti-parallel
Strand 6
D
720 725anti-parallel
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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
23 25first strand
Strand 2
F
21 23anti-parallel
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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
105 110first strand
Strand 2
E
66 71parallel
Strand 3
E
133 135parallel
Strand 4
E
158 160parallel
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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
223 224first strand
Strand 2
E
216 220anti-parallel
Strand 3
E
190 193parallel
Strand 4
E
259 262parallel
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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
282 284first strand
Strand 2
E
306 308parallel
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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
497 499first strand
Strand 2
E
469 473parallel
Strand 3
E
444 447parallel
Strand 4
E
551 554parallel
Strand 5
E
731 733parallel
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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
664 668first strand
Strand 2
E
629 632parallel
Strand 3
E
694 696parallel
Strand 4
E
591 596parallel
Strand 5
E
581 588anti-parallel
Strand 6
E
720 725anti-parallel
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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
105 110first strand
Strand 2
F
66 71parallel
Strand 3
F
133 135parallel
Strand 4
F
158 160parallel
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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
223 224first strand
Strand 2
F
216 220anti-parallel
Strand 3
F
190 193parallel
Strand 4
F
259 262parallel
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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
282 284first strand
Strand 2
F
306 308parallel
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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
497 499first strand
Strand 2
F
469 473parallel
Strand 3
F
444 447parallel
Strand 4
F
551 554parallel
Strand 5
F
731 733parallel
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There are 6 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
664 668first strand
Strand 2
F
629 632parallel
Strand 3
F
694 696parallel
Strand 4
F
591 596parallel
Strand 5
F
581 588anti-parallel
Strand 6
F
720 725anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il