Analysis of interatomic Contacts of Structural Units in PDB entry:
8JZR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8JZR entry

There is 1 chain in PDB entry 8JZR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ARG 18ASP 558
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 8JZR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
18 28Right-handed alpha
Helix 2
AA2
B
34 57Right-handed alpha
Helix 3
AA3
B
57 63Right-handed alpha
Helix 4
AA4
B
70 98Right-handed alpha
Helix 5
AA5
B
101 118Right-handed alpha
Helix 6
AA6
B
118 125Right-handed alpha
Helix 7
AA7
B
125 134Right-handed alpha
Helix 8
AA8
B
153 184Right-handed alpha
Helix 9
AA9
B
186 212Right-handed alpha
Helix 10
AB1
B
212 220Right-handed alpha
Helix 11
AB2
B
221 243Right-handed alpha
Helix 12
AB3
B
312 327Right-handed alpha
Helix 13
AB4
B
328 348Right-handed alpha
Helix 14
AB5
B
366 389Right-handed alpha
Helix 15
AB6
B
390 395Right-handed alpha
Helix 16
AB7
B
402 431Right-handed alpha
Helix 17
AB8
B
454 479Right-handed alpha
Helix 18
AB9
B
487 510Right-handed alpha
Helix 19
AC1
B
531 558Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8JZR.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
349 350first strand
Strand 2
B
442 450parallel
Strand 3
B
435 439anti-parallel
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