Analysis of interatomic Contacts of Structural Units in PDB entry:
8JZS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8JZS entry

There are 2 chains in PDB entry 8JZS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ARG 18ASP 558
A
 ARG 18ASP 558
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 8JZS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
18 28Right-handed alpha
Helix 2
AA2
B
34 57Right-handed alpha
Helix 3
AA3
B
57 63Right-handed alpha
Helix 4
AA4
B
70 98Right-handed alpha
Helix 5
AA5
B
101 118Right-handed alpha
Helix 6
AA6
B
118 125Right-handed alpha
Helix 7
AA7
B
125 134Right-handed alpha
Helix 8
AA8
B
153 184Right-handed alpha
Helix 9
AA9
B
189 212Right-handed alpha
Helix 10
AB1
B
212 220Right-handed alpha
Helix 11
AB2
B
221 243Right-handed alpha
Helix 12
AB3
B
254 262Right-handed alpha
Helix 13
AB4
B
310 327Right-handed alpha
Helix 14
AB5
B
328 348Right-handed alpha
Helix 15
AB6
B
366 389Right-handed alpha
Helix 16
AB7
B
390 395Right-handed alpha
Helix 17
AB8
B
402 431Right-handed alpha
Helix 18
AB9
B
454 479Right-handed alpha
Helix 19
AC1
B
487 510Right-handed alpha
Helix 20
AC2
B
531 558Right-handed alpha
Helix 21
AC3
A
19 28Right-handed alpha
Helix 22
AC4
A
34 57Right-handed alpha
Helix 23
AC5
A
57 63Right-handed alpha
Helix 24
AC6
A
70 98Right-handed alpha
Helix 25
AC7
A
101 118Right-handed alpha
Helix 26
AC8
A
118 125Right-handed alpha
Helix 27
AC9
A
125 134Right-handed alpha
Helix 28
AD1
A
153 184Right-handed alpha
Helix 29
AD2
A
189 212Right-handed alpha
Helix 30
AD3
A
212 220Right-handed alpha
Helix 31
AD4
A
221 243Right-handed alpha
Helix 32
AD5
A
254 262Right-handed alpha
Helix 33
AD6
A
310 327Right-handed alpha
Helix 34
AD7
A
328 348Right-handed alpha
Helix 35
AD8
A
366 389Right-handed alpha
Helix 36
AD9
A
390 395Right-handed alpha
Helix 37
AE1
A
402 431Right-handed alpha
Helix 38
AE2
A
454 479Right-handed alpha
Helix 39
AE3
A
487 510Right-handed alpha
Helix 40
AE4
A
531 558Right-handed alpha
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There are 2 sheets in PDB entry 8JZS. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
349 350first strand
Strand 2
B
442 450parallel
Strand 3
B
435 439anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
349 350first strand
Strand 2
A
442 450parallel
Strand 3
A
435 439anti-parallel
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