Analysis of interatomic Contacts of Structural Units in PDB entry:
8JZU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8JZU entry

There are 2 chains in PDB entry 8JZU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 32ASP 558
B
 MET 1ASN 14
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 8JZU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 57Right-handed alpha
Helix 2
AA2
A
57 63Right-handed alpha
Helix 3
AA3
A
70 99Right-handed alpha
Helix 4
AA4
A
102 125Right-handed alpha
Helix 5
AA5
A
125 134Right-handed alpha
Helix 6
AA6
A
153 184Right-handed alpha
Helix 7
AA7
A
187 220Right-handed alpha
Helix 8
AA8
A
221 243Right-handed alpha
Helix 9
AA9
A
255 267Right-handed alpha
Helix 10
AB1
A
308 337Right-handed alpha
Helix 11
AB2
A
341 348Right-handed alpha
Helix 12
AB3
A
367 396Right-handed alpha
Helix 13
AB4
A
400 430Right-handed alpha
Helix 14
AB5
A
450 453Right-handed 310
Helix 15
AB6
A
454 479Right-handed alpha
Helix 16
AB7
A
487 511Right-handed alpha
Helix 17
AB8
A
531 558Right-handed alpha
Helix 18
AB9
B
3 8Right-handed alpha
Helix 19
AC1
B
9 13Right-handed 310
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There is 1 sheet (AA1) in PDB entry 8JZU.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
435 439first strand
Strand 2
A
442 446anti-parallel
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