Analysis of interatomic Contacts of Structural Units in PDB entry:
8K0B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8K0B entry

There is 1 chain in PDB entry 8K0B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 26GLU 714
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 8K0B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 61Right-handed alpha
Helix 2
AA2
A
63 73Right-handed alpha
Helix 3
AA3
A
75 79Right-handed 310
Helix 4
AA4
A
92 98Right-handed alpha
Helix 5
AA5
A
124 146Right-handed alpha
Helix 6
AA6
A
146 151Right-handed alpha
Helix 7
AA7
A
151 158Right-handed alpha
Helix 8
AA8
A
182 206Right-handed alpha
Helix 9
AA9
A
231 243Right-handed alpha
Helix 10
AB1
A
257 285Right-handed alpha
Helix 11
AB2
A
292 296Right-handed 310
Helix 12
AB3
A
311 334Right-handed alpha
Helix 13
AB4
A
347 359Right-handed alpha
Helix 14
AB5
A
360 364Right-handed 310
Helix 15
AB6
A
372 377Right-handed alpha
Helix 16
AB7
A
406 429Right-handed alpha
Helix 17
AB8
A
446 477Right-handed alpha
Helix 18
AB9
A
480 502Right-handed alpha
Helix 19
AC1
A
502 507Right-handed alpha
Helix 20
AC2
A
540 560Right-handed alpha
Helix 21
AC3
A
562 574Right-handed alpha
Helix 22
AC4
A
578 587Right-handed alpha
Helix 23
AC5
A
593 612Right-handed alpha
Helix 24
AC6
A
617 640Right-handed alpha
Helix 25
AC7
A
647 661Right-handed alpha
Helix 26
AC8
A
661 677Right-handed alpha
Helix 27
AC9
A
681 712Right-handed alpha
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There are 2 sheets in PDB entry 8K0B. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 255first strand
Strand 2
A
337 345anti-parallel
Strand 3
A
219 223anti-parallel
Strand 4
A
382 385anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 289first strand
Strand 2
A
309 310anti-parallel
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