Analysis of interatomic Contacts of Structural Units in PDB entry:
8K12


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8K12 entry

There are 2 chains in PDB entry 8K12 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 288LEU 821
B
 VAL 288LEU 821
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 28 helices in PDB entry 8K12. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
289 317Right-handed alpha
Helix 2
AA2
A
451 479Right-handed alpha
Helix 3
AA3
A
499 505Right-handed alpha
Helix 4
AA4
A
506 532Right-handed alpha
Helix 5
AA5
A
547 568Right-handed alpha
Helix 6
AA6
A
577 596Right-handed alpha
Helix 7
AA7
A
603 625Right-handed alpha
Helix 8
AA8
A
630 652Right-handed alpha
Helix 9
AA9
A
687 709Right-handed alpha
Helix 10
AB1
A
713 740Right-handed alpha
Helix 11
AB2
A
745 767Right-handed alpha
Helix 12
AB3
A
776 781Right-handed alpha
Helix 13
AB4
A
782 784Right-handed 310
Helix 14
AB5
A
794 816Right-handed alpha
Helix 15
AB6
B
289 317Right-handed alpha
Helix 16
AB7
B
451 479Right-handed alpha
Helix 17
AB8
B
499 505Right-handed alpha
Helix 18
AB9
B
506 532Right-handed alpha
Helix 19
AC1
B
547 568Right-handed alpha
Helix 20
AC2
B
577 596Right-handed alpha
Helix 21
AC3
B
603 625Right-handed alpha
Helix 22
AC4
B
630 652Right-handed alpha
Helix 23
AC5
B
687 709Right-handed alpha
Helix 24
AC6
B
713 740Right-handed alpha
Helix 25
AC7
B
745 767Right-handed alpha
Helix 26
AC8
B
776 781Right-handed alpha
Helix 27
AC9
B
782 784Right-handed 310
Helix 28
AD1
B
794 816Right-handed alpha
Back to top of page
There are no sheets in PDB entry 8K12
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il