Analysis of interatomic Contacts of Structural Units in PDB entry:
8K1B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8K1B entry

There are 2 chains in PDB entry 8K1B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 47SER 300
B
 ASP 47SER 300
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 8K1B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
115 117Right-handed 310
Helix 2
AA2
A
251 253Right-handed 310
Helix 3
AA3
B
115 117Right-handed 310
Helix 4
AA4
B
251 253Right-handed 310
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There are 10 sheets in PDB entry 8K1B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 56first strand
Strand 2
A
157 165anti-parallel
Strand 3
A
78 83anti-parallel
Strand 4
A
124 128anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 70first strand
Strand 2
A
141 150anti-parallel
Strand 3
A
93 98anti-parallel
Strand 4
A
103 108anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 113first strand
Strand 2
A
119 122anti-parallel
Strand 3
A
282 283parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 181first strand
Strand 2
A
291 299anti-parallel
Strand 3
A
199 205anti-parallel
Strand 4
A
243 249anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 192first strand
Strand 2
A
257 264anti-parallel
Strand 3
A
213 219anti-parallel
Strand 4
A
236 240anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 56first strand
Strand 2
B
157 165anti-parallel
Strand 3
B
78 83anti-parallel
Strand 4
B
124 128anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 70first strand
Strand 2
B
141 150anti-parallel
Strand 3
B
93 98anti-parallel
Strand 4
B
103 108anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
110 113first strand
Strand 2
B
119 122anti-parallel
Strand 3
B
282 283parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
177 181first strand
Strand 2
B
291 299anti-parallel
Strand 3
B
199 205anti-parallel
Strand 4
B
243 249anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
187 192first strand
Strand 2
B
257 264anti-parallel
Strand 3
B
213 219anti-parallel
Strand 4
B
236 240anti-parallel
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