Analysis of interatomic Contacts of Structural Units in PDB entry:
8K2V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8K2V entry

There are 12 chains in PDB entry 8K2V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 504GLU 717
B
ALA 504GLU 717
C
ALA 504GLU 717
D
ALA 504GLU 717
E
ALA 504GLU 717
F
ALA 504GLU 717
G
TYR 23MET 563
I
TYR 23MET 563
J
TYR 23MET 563
K
TYR 23MET 563
L
TYR 23MET 563
H
TYR 23MET 563
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are168 helices in PDB entry 8K2V. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
504 530Right-handed alpha
Helix 2
AA2
A
535 539Right-handed 310
Helix 3
AA3
A
639 645Right-handed alpha
Helix 4
AA4
B
505 530Right-handed alpha
Helix 5
AA5
B
535 539Right-handed 310
Helix 6
AA6
B
639 645Right-handed alpha
Helix 7
AA7
C
505 530Right-handed alpha
Helix 8
AA8
C
535 539Right-handed 310
Helix 9
AA9
C
639 645Right-handed alpha
Helix 10
AB1
D
505 530Right-handed alpha
Helix 11
AB2
D
535 539Right-handed 310
Helix 12
AB3
D
639 645Right-handed alpha
Helix 13
AB4
E
505 530Right-handed alpha
Helix 14
AB5
E
535 539Right-handed 310
Helix 15
AB6
E
639 645Right-handed alpha
Helix 16
AB7
F
505 530Right-handed alpha
Helix 17
AB8
F
535 539Right-handed 310
Helix 18
AB9
F
639 645Right-handed alpha
Helix 19
AC1
G
39 65Right-handed alpha
Helix 20
AC2
G
68 78Right-handed alpha
Helix 21
AC3
G
82 91Right-handed alpha
Helix 22
AC4
G
114 117Right-handed 310
Helix 23
AC5
G
140 144Right-handed 310
Helix 24
AC6
G
146 164Right-handed alpha
Helix 25
AC7
G
192 204Right-handed alpha
Helix 26
AC8
G
221 227Right-handed alpha
Helix 27
AC9
G
243 252Right-handed alpha
Helix 28
AD1
G
256 261Right-handed alpha
Helix 29
AD2
G
262 269Right-handed alpha
Helix 30
AD3
G
279 294Right-handed alpha
Helix 31
AD4
G
315 322Right-handed alpha
Helix 32
AD5
G
330 339Right-handed alpha
Helix 33
AD6
G
340 343Right-handed 310
Helix 34
AD7
G
377 395Right-handed alpha
Helix 35
AD8
G
410 416Right-handed alpha
Helix 36
AD9
G
417 432Right-handed alpha
Helix 37
AE1
G
447 452Right-handed alpha
Helix 38
AE2
G
454 458Right-handed 310
Helix 39
AE3
G
474 493Right-handed alpha
Helix 40
AE4
G
501 518Right-handed alpha
Helix 41
AE5
G
518 525Right-handed alpha
Helix 42
AE6
G
533 535Right-handed 310
Helix 43
AE7
G
536 549Right-handed alpha
Helix 44
AE8
I
39 65Right-handed alpha
Helix 45
AE9
I
68 78Right-handed alpha
Helix 46
AF1
I
82 91Right-handed alpha
Helix 47
AF2
I
114 117Right-handed 310
Helix 48
AF3
I
140 144Right-handed 310
Helix 49
AF4
I
146 164Right-handed alpha
Helix 50
AF5
I
192 204Right-handed alpha
Helix 51
AF6
I
221 227Right-handed alpha
Helix 52
AF7
I
243 252Right-handed alpha
Helix 53
AF8
I
256 261Right-handed alpha
Helix 54
AF9
I
262 269Right-handed alpha
Helix 55
AG1
I
279 294Right-handed alpha
Helix 56
AG2
I
315 322Right-handed alpha
Helix 57
AG3
I
330 339Right-handed alpha
Helix 58
AG4
I
340 343Right-handed 310
Helix 59
AG5
I
377 395Right-handed alpha
Helix 60
AG6
I
410 416Right-handed alpha
Helix 61
AG7
I
417 432Right-handed alpha
Helix 62
AG8
I
447 452Right-handed alpha
Helix 63
AG9
I
454 458Right-handed 310
Helix 64
AH1
I
474 493Right-handed alpha
Helix 65
AH2
I
501 518Right-handed alpha
Helix 66
AH3
I
518 525Right-handed alpha
Helix 67
AH4
I
533 535Right-handed 310
Helix 68
AH5
I
536 549Right-handed alpha
Helix 69
AH6
J
39 65Right-handed alpha
Helix 70
AH7
J
68 78Right-handed alpha
Helix 71
AH8
J
82 91Right-handed alpha
Helix 72
AH9
J
114 117Right-handed 310
Helix 73
AI1
J
140 144Right-handed 310
Helix 74
AI2
J
146 164Right-handed alpha
Helix 75
AI3
J
192 204Right-handed alpha
Helix 76
AI4
J
221 227Right-handed alpha
Helix 77
AI5
J
243 252Right-handed alpha
Helix 78
AI6
J
256 261Right-handed alpha
Helix 79
AI7
J
262 269Right-handed alpha
Helix 80
AI8
J
279 294Right-handed alpha
Helix 81
AI9
J
315 322Right-handed alpha
Helix 82
AJ1
J
330 339Right-handed alpha
Helix 83
AJ2
J
340 343Right-handed 310
Helix 84
AJ3
J
377 395Right-handed alpha
Helix 85
AJ4
J
410 416Right-handed alpha
Helix 86
AJ5
J
417 432Right-handed alpha
Helix 87
AJ6
J
447 452Right-handed alpha
Helix 88
AJ7
J
454 458Right-handed 310
Helix 89
AJ8
J
474 493Right-handed alpha
Helix 90
AJ9
J
501 518Right-handed alpha
Helix 91
AK1
J
518 525Right-handed alpha
Helix 92
AK2
J
533 535Right-handed 310
Helix 93
AK3
J
536 549Right-handed alpha
Helix 94
AK4
K
39 65Right-handed alpha
Helix 95
AK5
K
68 78Right-handed alpha
Helix 96
AK6
K
82 91Right-handed alpha
Helix 97
AK7
K
114 117Right-handed 310
Helix 98
AK8
K
140 144Right-handed 310
Helix 99
AK9
K
146 164Right-handed alpha
Helix 100
AL1
K
192 204Right-handed alpha
Helix 101
AL2
K
221 227Right-handed alpha
Helix 102
AL3
K
243 252Right-handed alpha
Helix 103
AL4
K
256 261Right-handed alpha
Helix 104
AL5
K
262 269Right-handed alpha
Helix 105
AL6
K
279 294Right-handed alpha
Helix 106
AL7
K
315 322Right-handed alpha
Helix 107
AL8
K
330 339Right-handed alpha
Helix 108
AL9
K
340 343Right-handed 310
Helix 109
AM1
K
377 395Right-handed alpha
Helix 110
AM2
K
410 416Right-handed alpha
Helix 111
AM3
K
417 432Right-handed alpha
Helix 112
AM4
K
447 452Right-handed alpha
Helix 113
AM5
K
454 458Right-handed 310
Helix 114
AM6
K
474 493Right-handed alpha
Helix 115
AM7
K
501 518Right-handed alpha
Helix 116
AM8
K
518 525Right-handed alpha
Helix 117
AM9
K
533 535Right-handed 310
Helix 118
AN1
K
536 549Right-handed alpha
Helix 119
AN2
L
39 65Right-handed alpha
Helix 120
AN3
L
68 78Right-handed alpha
Helix 121
AN4
L
82 91Right-handed alpha
Helix 122
AN5
L
114 117Right-handed 310
Helix 123
AN6
L
140 144Right-handed 310
Helix 124
AN7
L
146 164Right-handed alpha
Helix 125
AN8
L
192 204Right-handed alpha
Helix 126
AN9
L
221 227Right-handed alpha
Helix 127
AO1
L
243 252Right-handed alpha
Helix 128
AO2
L
256 261Right-handed alpha
Helix 129
AO3
L
262 269Right-handed alpha
Helix 130
AO4
L
279 294Right-handed alpha
Helix 131
AO5
L
315 322Right-handed alpha
Helix 132
AO6
L
330 339Right-handed alpha
Helix 133
AO7
L
340 343Right-handed 310
Helix 134
AO8
L
377 395Right-handed alpha
Helix 135
AO9
L
410 416Right-handed alpha
Helix 136
AP1
L
417 432Right-handed alpha
Helix 137
AP2
L
447 452Right-handed alpha
Helix 138
AP3
L
454 458Right-handed 310
Helix 139
AP4
L
474 493Right-handed alpha
Helix 140
AP5
L
501 518Right-handed alpha
Helix 141
AP6
L
518 525Right-handed alpha
Helix 142
AP7
L
533 535Right-handed 310
Helix 143
AP8
L
536 549Right-handed alpha
Helix 144
AP9
H
39 65Right-handed alpha
Helix 145
AQ1
H
68 78Right-handed alpha
Helix 146
AQ2
H
82 91Right-handed alpha
Helix 147
AQ3
H
114 117Right-handed 310
Helix 148
AQ4
H
140 144Right-handed 310
Helix 149
AQ5
H
146 164Right-handed alpha
Helix 150
AQ6
H
192 204Right-handed alpha
Helix 151
AQ7
H
221 227Right-handed alpha
Helix 152
AQ8
H
243 252Right-handed alpha
Helix 153
AQ9
H
256 261Right-handed alpha
Helix 154
AR1
H
262 269Right-handed alpha
Helix 155
AR2
H
279 294Right-handed alpha
Helix 156
AR3
H
315 322Right-handed alpha
Helix 157
AR4
H
330 339Right-handed alpha
Helix 158
AR5
H
340 343Right-handed 310
Helix 159
AR6
H
377 395Right-handed alpha
Helix 160
AR7
H
410 416Right-handed alpha
Helix 161
AR8
H
417 432Right-handed alpha
Helix 162
AR9
H
447 452Right-handed alpha
Helix 163
AS1
H
454 458Right-handed 310
Helix 164
AS2
H
474 493Right-handed alpha
Helix 165
AS3
H
501 518Right-handed alpha
Helix 166
AS4
H
518 525Right-handed alpha
Helix 167
AS5
H
533 535Right-handed 310
Helix 168
AS6
H
536 549Right-handed alpha
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There are 36 sheets in PDB entry 8K2V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
550 557first strand
Strand 2
A
560 568anti-parallel
Strand 3
A
574 578anti-parallel
Strand 4
A
581 592anti-parallel
Strand 5
A
595 602anti-parallel
Strand 6
A
605 613anti-parallel
Strand 7
A
617 621anti-parallel
Strand 8
A
626 630anti-parallel
Strand 9
A
550 557anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
656 660first strand
Strand 2
A
673 678anti-parallel
Strand 3
A
683 687anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
694 697first strand
Strand 2
A
712 714anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
550 557first strand
Strand 2
B
560 568anti-parallel
Strand 3
B
574 578anti-parallel
Strand 4
B
581 592anti-parallel
Strand 5
B
595 602anti-parallel
Strand 6
B
605 613anti-parallel
Strand 7
B
617 621anti-parallel
Strand 8
B
626 630anti-parallel
Strand 9
B
550 557anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
656 660first strand
Strand 2
B
673 678anti-parallel
Strand 3
B
683 687anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
694 697first strand
Strand 2
B
712 714anti-parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
550 557first strand
Strand 2
C
560 568anti-parallel
Strand 3
C
574 578anti-parallel
Strand 4
C
581 592anti-parallel
Strand 5
C
595 602anti-parallel
Strand 6
C
605 613anti-parallel
Strand 7
C
617 621anti-parallel
Strand 8
C
626 630anti-parallel
Strand 9
C
550 557anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
656 660first strand
Strand 2
C
673 678anti-parallel
Strand 3
C
683 687anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
694 697first strand
Strand 2
C
712 714anti-parallel
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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
550 557first strand
Strand 2
D
560 568anti-parallel
Strand 3
D
574 578anti-parallel
Strand 4
D
581 592anti-parallel
Strand 5
D
595 602anti-parallel
Strand 6
D
605 613anti-parallel
Strand 7
D
617 621anti-parallel
Strand 8
D
626 630anti-parallel
Strand 9
D
550 557anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
656 660first strand
Strand 2
D
673 678anti-parallel
Strand 3
D
683 687anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
694 697first strand
Strand 2
D
712 714anti-parallel
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There are 9 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
550 557first strand
Strand 2
E
560 568anti-parallel
Strand 3
E
574 578anti-parallel
Strand 4
E
581 592anti-parallel
Strand 5
E
595 602anti-parallel
Strand 6
E
605 613anti-parallel
Strand 7
E
617 621anti-parallel
Strand 8
E
626 630anti-parallel
Strand 9
E
550 557anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
656 660first strand
Strand 2
E
673 678anti-parallel
Strand 3
E
683 687anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
694 697first strand
Strand 2
E
712 714anti-parallel
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There are 9 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
550 557first strand
Strand 2
F
560 568anti-parallel
Strand 3
F
574 577anti-parallel
Strand 4
F
582 592anti-parallel
Strand 5
F
595 602anti-parallel
Strand 6
F
605 613anti-parallel
Strand 7
F
617 621anti-parallel
Strand 8
F
626 630anti-parallel
Strand 9
F
550 557anti-parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
656 660first strand
Strand 2
F
673 678anti-parallel
Strand 3
F
683 687anti-parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
694 697first strand
Strand 2
F
712 714anti-parallel
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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
98 99first strand
Strand 2
G
119 126anti-parallel
Strand 3
G
129 136anti-parallel
Strand 4
G
167 171parallel
Strand 5
G
208 212parallel
Strand 6
G
229 233parallel
Strand 7
G
275 277parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
215 217first strand
Strand 2
G
238 240parallel
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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
345 346first strand
Strand 2
G
355 362anti-parallel
Strand 3
G
365 372anti-parallel
Strand 4
G
398 401parallel
Strand 5
G
436 440parallel
Strand 6
G
461 464parallel
Strand 7
G
530 531parallel
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There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
98 99first strand
Strand 2
I
119 126anti-parallel
Strand 3
I
129 136anti-parallel
Strand 4
I
167 171parallel
Strand 5
I
208 212parallel
Strand 6
I
229 233parallel
Strand 7
I
275 277parallel
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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
215 217first strand
Strand 2
I
238 240parallel
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There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
345 346first strand
Strand 2
I
355 362anti-parallel
Strand 3
I
365 372anti-parallel
Strand 4
I
398 401parallel
Strand 5
I
436 440parallel
Strand 6
I
461 464parallel
Strand 7
I
530 531parallel
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There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
98 99first strand
Strand 2
J
119 126anti-parallel
Strand 3
J
129 136anti-parallel
Strand 4
J
167 171parallel
Strand 5
J
208 212parallel
Strand 6
J
229 233parallel
Strand 7
J
275 277parallel
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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
215 217first strand
Strand 2
J
238 240parallel
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There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
345 346first strand
Strand 2
J
355 362anti-parallel
Strand 3
J
365 372anti-parallel
Strand 4
J
398 401parallel
Strand 5
J
436 440parallel
Strand 6
J
461 464parallel
Strand 7
J
530 531parallel
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There are 7 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
98 99first strand
Strand 2
K
119 126anti-parallel
Strand 3
K
129 136anti-parallel
Strand 4
K
167 171parallel
Strand 5
K
208 212parallel
Strand 6
K
229 233parallel
Strand 7
K
275 277parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
215 217first strand
Strand 2
K
238 240parallel
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There are 7 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
345 346first strand
Strand 2
K
355 362anti-parallel
Strand 3
K
365 372anti-parallel
Strand 4
K
398 401parallel
Strand 5
K
436 440parallel
Strand 6
K
461 464parallel
Strand 7
K
530 531parallel
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There are 7 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
98 99first strand
Strand 2
L
119 126anti-parallel
Strand 3
L
129 136anti-parallel
Strand 4
L
167 171parallel
Strand 5
L
208 212parallel
Strand 6
L
229 233parallel
Strand 7
L
275 277parallel
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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
215 217first strand
Strand 2
L
238 240parallel
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There are 7 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
345 346first strand
Strand 2
L
355 362anti-parallel
Strand 3
L
365 372anti-parallel
Strand 4
L
398 401parallel
Strand 5
L
436 440parallel
Strand 6
L
461 464parallel
Strand 7
L
530 531parallel
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There are 7 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
98 99first strand
Strand 2
H
119 126anti-parallel
Strand 3
H
129 136anti-parallel
Strand 4
H
167 171parallel
Strand 5
H
208 212parallel
Strand 6
H
229 233parallel
Strand 7
H
275 277parallel
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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
215 217first strand
Strand 2
H
238 240parallel
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There are 7 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
345 346first strand
Strand 2
H
355 362anti-parallel
Strand 3
H
365 372anti-parallel
Strand 4
H
398 401parallel
Strand 5
H
436 440parallel
Strand 6
H
461 464parallel
Strand 7
H
530 531parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il