Analysis of interatomic Contacts of Structural Units in PDB entry:
8K32


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8K32 entry

There are 4 chains in PDB entry 8K32 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2LEU 333
B
 ALA 2LEU 333
C
 ALA 2LYS 334
D
 ALA 2VAL 302
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 81 helices in PDB entry 8K32. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 10Right-handed 310
Helix 2
AA2
A
11 16Right-handed 310
Helix 3
AA3
A
26 39Right-handed alpha
Helix 4
AA4
A
52 65Right-handed alpha
Helix 5
AA5
A
72 79Right-handed alpha
Helix 6
AA6
A
87 99Right-handed alpha
Helix 7
AA7
A
100 103Right-handed 310
Helix 8
AA8
A
114 119Right-handed alpha
Helix 9
AA9
A
138 148Right-handed alpha
Helix 10
AB1
A
165 177Right-handed alpha
Helix 11
AB2
A
178 183Right-handed alpha
Helix 12
AB3
A
188 203Right-handed alpha
Helix 13
AB4
A
205 222Right-handed alpha
Helix 14
AB5
A
225 234Right-handed alpha
Helix 15
AB6
A
236 256Right-handed alpha
Helix 16
AB7
A
257 272Right-handed alpha
Helix 17
AB8
A
273 289Right-handed alpha
Helix 18
AB9
A
290 302Right-handed alpha
Helix 19
AC1
A
304 316Right-handed alpha
Helix 20
AC2
A
317 329Right-handed alpha
Helix 21
AC3
B
6 10Right-handed 310
Helix 22
AC4
B
11 16Right-handed 310
Helix 23
AC5
B
26 38Right-handed alpha
Helix 24
AC6
B
53 65Right-handed alpha
Helix 25
AC7
B
72 79Right-handed alpha
Helix 26
AC8
B
87 89Right-handed 310
Helix 27
AC9
B
90 99Right-handed alpha
Helix 28
AD1
B
100 103Right-handed 310
Helix 29
AD2
B
114 119Right-handed alpha
Helix 30
AD3
B
138 147Right-handed alpha
Helix 31
AD4
B
165 178Right-handed alpha
Helix 32
AD5
B
188 203Right-handed alpha
Helix 33
AD6
B
205 222Right-handed alpha
Helix 34
AD7
B
225 234Right-handed alpha
Helix 35
AD8
B
236 256Right-handed alpha
Helix 36
AD9
B
257 272Right-handed alpha
Helix 37
AE1
B
273 289Right-handed alpha
Helix 38
AE2
B
290 302Right-handed alpha
Helix 39
AE3
B
304 316Right-handed alpha
Helix 40
AE4
B
317 329Right-handed alpha
Helix 41
AE5
C
6 10Right-handed 310
Helix 42
AE6
C
11 16Right-handed 310
Helix 43
AE7
C
26 39Right-handed alpha
Helix 44
AE8
C
52 65Right-handed alpha
Helix 45
AE9
C
72 79Right-handed alpha
Helix 46
AF1
C
87 99Right-handed alpha
Helix 47
AF2
C
100 103Right-handed 310
Helix 48
AF3
C
114 119Right-handed alpha
Helix 49
AF4
C
138 148Right-handed alpha
Helix 50
AF5
C
165 177Right-handed alpha
Helix 51
AF6
C
178 183Right-handed alpha
Helix 52
AF7
C
188 203Right-handed alpha
Helix 53
AF8
C
205 222Right-handed alpha
Helix 54
AF9
C
225 234Right-handed alpha
Helix 55
AG1
C
236 256Right-handed alpha
Helix 56
AG2
C
257 272Right-handed alpha
Helix 57
AG3
C
273 289Right-handed alpha
Helix 58
AG4
C
290 302Right-handed alpha
Helix 59
AG5
C
304 316Right-handed alpha
Helix 60
AG6
C
317 329Right-handed alpha
Helix 61
AG7
C
330 334Right-handed 310
Helix 62
AG8
D
6 10Right-handed 310
Helix 63
AG9
D
11 16Right-handed 310
Helix 64
AH1
D
26 39Right-handed alpha
Helix 65
AH2
D
52 65Right-handed alpha
Helix 66
AH3
D
72 79Right-handed alpha
Helix 67
AH4
D
90 99Right-handed alpha
Helix 68
AH5
D
100 103Right-handed 310
Helix 69
AH6
D
114 119Right-handed alpha
Helix 70
AH7
D
138 148Right-handed alpha
Helix 71
AH8
D
165 177Right-handed alpha
Helix 72
AH9
D
178 183Right-handed alpha
Helix 73
AI1
D
188 203Right-handed alpha
Helix 74
AI2
D
205 223Right-handed alpha
Helix 75
AI3
D
225 234Right-handed alpha
Helix 76
AI4
D
236 256Right-handed alpha
Helix 77
AI5
D
257 272Right-handed alpha
Helix 78
AI6
D
273 289Right-handed alpha
Helix 79
AI7
D
290 302Right-handed alpha
Helix 80
AI8
D
304 316Right-handed alpha
Helix 81
AI9
D
317 329Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 8K32. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 5first strand
Strand 2
A
184 186anti-parallel
Strand 3
A
154 160parallel
Strand 4
A
129 135anti-parallel
Strand 5
A
108 111parallel
Strand 6
A
81 84parallel
Strand 7
A
19 23parallel
Strand 8
A
42 47parallel
Strand 9
A
68 71parallel
Back to list of sheets
Back to top of page

There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 5first strand
Strand 2
B
184 186anti-parallel
Strand 3
B
154 160parallel
Strand 4
B
129 135anti-parallel
Strand 5
B
108 111parallel
Strand 6
B
81 84parallel
Strand 7
B
19 23parallel
Strand 8
B
42 47parallel
Strand 9
B
68 71parallel
Back to list of sheets
Back to top of page

There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 5first strand
Strand 2
C
184 186anti-parallel
Strand 3
C
154 160parallel
Strand 4
C
129 135anti-parallel
Strand 5
C
108 111parallel
Strand 6
C
81 84parallel
Strand 7
C
19 23parallel
Strand 8
C
42 47parallel
Strand 9
C
68 71parallel
Back to list of sheets
Back to top of page

There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4 5first strand
Strand 2
D
184 186anti-parallel
Strand 3
D
154 160parallel
Strand 4
D
129 135anti-parallel
Strand 5
D
108 111parallel
Strand 6
D
81 84parallel
Strand 7
D
19 23parallel
Strand 8
D
42 47parallel
Strand 9
D
69 71parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il