Analysis of interatomic Contacts of Structural Units in PDB entry:
8K6L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8K6L entry

There is 1 chain in PDB entry 8K6L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 25TYR 651
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 8K6L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 51Right-handed alpha
Helix 2
AA2
A
51 60Right-handed alpha
Helix 3
AA3
A
62 71Right-handed alpha
Helix 4
AA4
A
71 88Right-handed alpha
Helix 5
AA5
A
89 91Right-handed 310
Helix 6
AA6
A
92 111Right-handed alpha
Helix 7
AA7
A
112 118Right-handed alpha
Helix 8
AA8
A
171 185Right-handed alpha
Helix 9
AA9
A
187 199Right-handed alpha
Helix 10
AB1
A
203 216Right-handed alpha
Helix 11
AB2
A
217 231Right-handed alpha
Helix 12
AB3
A
259 272Right-handed alpha
Helix 13
AB4
A
273 278Right-handed 310
Helix 14
AB5
A
324 334Right-handed alpha
Helix 15
AB6
A
335 367Right-handed alpha
Helix 16
AB7
A
375 401Right-handed alpha
Helix 17
AB8
A
403 423Right-handed alpha
Helix 18
AB9
A
424 428Right-handed 310
Helix 19
AC1
A
457 461Right-handed 310
Helix 20
AC2
A
527 550Right-handed alpha
Helix 21
AC3
A
553 560Right-handed alpha
Helix 22
AC4
A
567 583Right-handed alpha
Helix 23
AC5
A
586 596Right-handed alpha
Helix 24
AC6
A
617 651Right-handed alpha
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There are 3 sheets in PDB entry 8K6L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
435 436first strand
Strand 2
A
480 481parallel
Strand 3
A
473 474anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
501 502first strand
Strand 2
A
518 519anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
599 602first strand
Strand 2
A
613 616anti-parallel
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