Analysis of interatomic Contacts of Structural Units in PDB entry:
8K76


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8K76 entry

There are 2 chains in PDB entry 8K76 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 249
B
 MET 1LYS 249
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 8K76. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 14Right-handed alpha
Helix 2
AA2
A
27 36Right-handed alpha
Helix 3
AA3
A
50 55Right-handed 310
Helix 4
AA4
A
72 79Right-handed alpha
Helix 5
AA5
A
89 104Right-handed alpha
Helix 6
AA6
A
133 137Right-handed 310
Helix 7
AA7
A
140 150Right-handed alpha
Helix 8
AA8
A
164 169Right-handed alpha
Helix 9
AA9
A
187 196Right-handed alpha
Helix 10
AB1
A
206 211Right-handed alpha
Helix 11
AB2
A
211 218Right-handed alpha
Helix 12
AB3
A
232 237Right-handed alpha
Helix 13
AB4
B
2 14Right-handed alpha
Helix 14
AB5
B
27 36Right-handed alpha
Helix 15
AB6
B
50 55Right-handed 310
Helix 16
AB7
B
72 79Right-handed alpha
Helix 17
AB8
B
89 103Right-handed alpha
Helix 18
AB9
B
133 137Right-handed 310
Helix 19
AC1
B
140 150Right-handed alpha
Helix 20
AC2
B
164 168Right-handed 310
Helix 21
AC3
B
187 196Right-handed alpha
Helix 22
AC4
B
206 211Right-handed alpha
Helix 23
AC5
B
211 218Right-handed alpha
Helix 24
AC6
B
232 237Right-handed alpha
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There are 2 sheets in PDB entry 8K76. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 111first strand
Strand 2
A
82 87parallel
Strand 3
A
61 65parallel
Strand 4
A
125 130parallel
Strand 5
A
151 162parallel
Strand 6
A
242 248anti-parallel
Strand 7
A
220 227anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 111first strand
Strand 2
B
82 87parallel
Strand 3
B
61 65parallel
Strand 4
B
125 130parallel
Strand 5
B
151 162parallel
Strand 6
B
242 248anti-parallel
Strand 7
B
220 227anti-parallel
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