Analysis of interatomic Contacts of Structural Units in PDB entry:
8K7B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8K7B entry

There are 2 chains in PDB entry 8K7B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 238GLY 827
B
 THR 238GLY 827
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 8K7B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
240 250Right-handed alpha
Helix 2
AA2
A
260 279Right-handed alpha
Helix 3
AA3
A
281 296Right-handed alpha
Helix 4
AA4
A
298 307Right-handed alpha
Helix 5
AA5
A
308 310Right-handed 310
Helix 6
AA6
A
311 317Right-handed alpha
Helix 7
AA7
A
351 355Right-handed 310
Helix 8
AA8
A
357 362Right-handed alpha
Helix 9
AA9
A
365 380Right-handed alpha
Helix 10
AB1
A
391 404Right-handed alpha
Helix 11
AB2
A
412 448Right-handed alpha
Helix 12
AB3
A
449 454Right-handed 310
Helix 13
AB4
A
461 466Right-handed alpha
Helix 14
AB5
A
470 478Right-handed alpha
Helix 15
AB6
A
481 486Right-handed alpha
Helix 16
AB7
A
492 522Right-handed alpha
Helix 17
AB8
A
526 533Right-handed alpha
Helix 18
AB9
A
534 536Right-handed 310
Helix 19
AC1
A
537 547Right-handed alpha
Helix 20
AC2
A
550 568Right-handed alpha
Helix 21
AC3
A
628 638Right-handed alpha
Helix 22
AC4
A
658 663Right-handed alpha
Helix 23
AC5
A
679 685Right-handed alpha
Helix 24
AC6
A
686 688Right-handed 310
Helix 25
AC7
A
692 701Right-handed alpha
Helix 26
AC8
A
705 710Right-handed alpha
Helix 27
AC9
A
714 718Right-handed 310
Helix 28
AD1
A
730 744Right-handed alpha
Helix 29
AD2
A
758 773Right-handed alpha
Helix 30
AD3
A
784 788Right-handed 310
Helix 31
AD4
A
808 813Right-handed alpha
Helix 32
AD5
A
816 827Right-handed alpha
Helix 33
AD6
B
240 251Right-handed alpha
Helix 34
AD7
B
260 279Right-handed alpha
Helix 35
AD8
B
281 296Right-handed alpha
Helix 36
AD9
B
298 316Right-handed alpha
Helix 37
AE1
B
334 350Right-handed alpha
Helix 38
AE2
B
351 355Right-handed 310
Helix 39
AE3
B
357 362Right-handed alpha
Helix 40
AE4
B
365 376Right-handed alpha
Helix 41
AE5
B
378 384Right-handed alpha
Helix 42
AE6
B
391 404Right-handed alpha
Helix 43
AE7
B
412 448Right-handed alpha
Helix 44
AE8
B
452 456Right-handed 310
Helix 45
AE9
B
461 466Right-handed alpha
Helix 46
AF1
B
470 491Right-handed alpha
Helix 47
AF2
B
492 522Right-handed alpha
Helix 48
AF3
B
528 536Right-handed alpha
Helix 49
AF4
B
537 547Right-handed alpha
Helix 50
AF5
B
550 568Right-handed alpha
Helix 51
AF6
B
628 637Right-handed alpha
Helix 52
AF7
B
658 663Right-handed alpha
Helix 53
AF8
B
679 686Right-handed alpha
Helix 54
AF9
B
692 700Right-handed alpha
Helix 55
AG1
B
705 710Right-handed alpha
Helix 56
AG2
B
714 718Right-handed 310
Helix 57
AG3
B
721 725Right-handed 310
Helix 58
AG4
B
730 744Right-handed alpha
Helix 59
AG5
B
761 771Right-handed alpha
Helix 60
AG6
B
807 814Right-handed alpha
Helix 61
AG7
B
816 827Right-handed alpha
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There are 6 sheets in PDB entry 8K7B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
612 613first strand
Strand 2
A
590 593anti-parallel
Strand 3
A
646 649anti-parallel
Strand 4
A
652 653anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
595 597first strand
Strand 2
A
606 609anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
666 669first strand
Strand 2
A
747 750parallel
Strand 3
A
778 781parallel
Strand 4
A
618 622parallel
Strand 5
A
793 797parallel
Strand 6
A
802 806anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
606 609first strand
Strand 2
B
590 597anti-parallel
Strand 3
B
612 613anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
606 609first strand
Strand 2
B
590 597anti-parallel
Strand 3
B
644 649anti-parallel
Strand 4
B
652 653anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
666 669first strand
Strand 2
B
747 750parallel
Strand 3
B
777 781parallel
Strand 4
B
618 622parallel
Strand 5
B
793 797parallel
Strand 6
B
802 806anti-parallel
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