Analysis of interatomic Contacts of Structural Units in PDB entry:
8K7M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8K7M entry

There are 4 chains in PDB entry 8K7M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ASN 1ALA 230
B
 ASN 1ALA 230
D
 ASN 1ALA 230
A
 ASN 1GLY 229
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 8K7M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
13 28Right-handed alpha
Helix 2
AA2
C
38 53Right-handed alpha
Helix 3
AA3
C
65 80Right-handed alpha
Helix 4
AA4
C
90 104Right-handed alpha
Helix 5
AA5
C
116 128Right-handed alpha
Helix 6
AA6
C
137 152Right-handed alpha
Helix 7
AA7
C
167 178Right-handed alpha
Helix 8
AA8
C
193 207Right-handed alpha
Helix 9
AA9
C
218 226Right-handed alpha
Helix 10
AB1
B
14 28Right-handed alpha
Helix 11
AB2
B
38 53Right-handed alpha
Helix 12
AB3
B
65 80Right-handed alpha
Helix 13
AB4
B
90 104Right-handed alpha
Helix 14
AB5
B
113 115Right-handed 310
Helix 15
AB6
B
116 128Right-handed alpha
Helix 16
AB7
B
139 152Right-handed alpha
Helix 17
AB8
B
167 178Right-handed alpha
Helix 18
AB9
B
193 207Right-handed alpha
Helix 19
AC1
B
218 226Right-handed alpha
Helix 20
AC2
D
13 27Right-handed alpha
Helix 21
AC3
D
38 53Right-handed alpha
Helix 22
AC4
D
65 80Right-handed alpha
Helix 23
AC5
D
90 104Right-handed alpha
Helix 24
AC6
D
114 128Right-handed alpha
Helix 25
AC7
D
137 152Right-handed alpha
Helix 26
AC8
D
167 178Right-handed alpha
Helix 27
AC9
D
193 207Right-handed alpha
Helix 28
AD1
D
218 226Right-handed alpha
Helix 29
AD2
A
13 28Right-handed alpha
Helix 30
AD3
A
38 53Right-handed alpha
Helix 31
AD4
A
65 80Right-handed alpha
Helix 32
AD5
A
90 104Right-handed alpha
Helix 33
AD6
A
116 128Right-handed alpha
Helix 34
AD7
A
137 152Right-handed alpha
Helix 35
AD8
A
167 178Right-handed alpha
Helix 36
AD9
A
193 207Right-handed alpha
Helix 37
AE1
A
218 226Right-handed alpha
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There are 4 sheets in PDB entry 8K7M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 7first strand
Strand 2
C
30 34parallel
Strand 3
C
56 62parallel
Strand 4
C
82 86parallel
Strand 5
C
108 113parallel
Strand 6
C
130 134parallel
Strand 7
C
156 161parallel
Strand 8
C
184 188parallel
Strand 9
C
210 215parallel
Strand 10
C
3 7parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 7first strand
Strand 2
B
29 35parallel
Strand 3
B
56 62parallel
Strand 4
B
82 86parallel
Strand 5
B
108 112parallel
Strand 6
B
130 135parallel
Strand 7
B
156 161parallel
Strand 8
B
184 188parallel
Strand 9
B
210 215parallel
Strand 10
B
3 7parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 7first strand
Strand 2
D
30 34parallel
Strand 3
D
56 62parallel
Strand 4
D
82 86parallel
Strand 5
D
108 113parallel
Strand 6
D
130 135parallel
Strand 7
D
156 161parallel
Strand 8
D
184 188parallel
Strand 9
D
210 215parallel
Strand 10
D
3 7parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 7first strand
Strand 2
A
30 34parallel
Strand 3
A
56 62parallel
Strand 4
A
82 86parallel
Strand 5
A
108 113parallel
Strand 6
A
130 135parallel
Strand 7
A
156 161parallel
Strand 8
A
184 188parallel
Strand 9
A
210 215parallel
Strand 10
A
3 7parallel
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