Analysis of interatomic Contacts of Structural Units in PDB entry:
8K7N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8K7N entry

There is 1 chain in PDB entry 8K7N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 32LEU 338
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 8K7N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 56Right-handed alpha
Helix 2
AA2
A
65 77Right-handed alpha
Helix 3
AA3
A
78 80Right-handed 310
Helix 4
AA4
A
90 99Right-handed alpha
Helix 5
AA5
A
106 111Right-handed alpha
Helix 6
AA6
A
112 113Right-handed 310
Helix 7
AA7
A
114 118Right-handed 310
Helix 8
AA8
A
142 146Right-handed 310
Helix 9
AA9
A
149 159Right-handed 310
Helix 10
AB1
A
168 183Right-handed alpha
Helix 11
AB2
A
183 197Right-handed alpha
Helix 12
AB3
A
203 213Right-handed alpha
Helix 13
AB4
A
223 231Right-handed alpha
Helix 14
AB5
A
249 252Right-handed 310
Helix 15
AB6
A
267 280Right-handed alpha
Helix 16
AB7
A
280 290Right-handed alpha
Helix 17
AB8
A
309 313Right-handed 310
Helix 18
AB9
A
319 323Right-handed 310
Helix 19
AC1
A
324 335Right-handed alpha
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There are 2 sheets in PDB entry 8K7N. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 63first strand
Strand 2
A
33 37parallel
Strand 3
A
84 86parallel
Strand 4
A
254 261anti-parallel
Strand 5
A
125 136anti-parallel
Strand 6
A
218 222anti-parallel
Strand 7
A
162 164parallel
Strand 8
A
198 200parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 63first strand
Strand 2
A
33 37parallel
Strand 3
A
84 86parallel
Strand 4
A
254 261anti-parallel
Strand 5
A
125 136anti-parallel
Strand 6
A
241 243anti-parallel
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